KEGG   Prodigiosinella confusarubida ATCC 39006: CWC46_08845
Entry
CWC46_08845       CDS       T05968                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
serq  Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:serq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:serq03021]
    CWC46_08845 (rpoE)
Transcription machinery [BR:serq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CWC46_08845 (rpoE)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20
Other DBs
NCBI-ProteinID: AUG99897
UniProt: A0A2I5T5Q6
Position
1897802..1898377
AA seq 191 aa
MSEQLADQVLVERVQKGDQNSFNLLVIRYQHKVASLVSRYVPPGDVPDVVQESFIKAYRA
LESFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENYENASALKEISNPEN
LMLSDELRRIVFRTIESLPEDLRLAITLRELDGLSYEEIASIMDCPVGTVRSRIFRAREA
IDNKVQPLIQR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagcgagcagttagcggatcaggttctggttgagcgggtccagaaaggagatcagaat
tcgttcaatttactggttattcgttaccagcataaagtggcgagtctggtatcccgttat
gttcctccgggagacgtgccggacgtagtgcaggaatcctttatcaaggcctatcgtgcg
ctggagtcttttcgtggcgatagtgctttttacacttggttgtaccgtatcgcggtgaat
acggcaaaaaattacctggtagcgcagggtcggcgacctccctctagcgatgtggacgcc
aacgatgctgaaaattatgaaaatgccagtgcattgaaagaaatatcgaaccctgagaat
ttaatgttgtcagatgagttgcgaagaattgttttccgtaccatagagtcactgcctgag
gatttacgtttggcaattactctgcgtgaactggatggactaagctatgaagagatagcg
tccataatggattgcccggtcggtactgttcggtcgaggattttccgcgctcgggaagcg
attgataataaagtacaaccacttattcagcgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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