KEGG   Prodigiosinella confusarubida ATCC 39006: CWC46_11810
Entry
CWC46_11810       CDS       T05968                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
serq  Prodigiosinella confusarubida ATCC 39006
Pathway
serq03030  DNA replication
serq03430  Mismatch repair
serq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:serq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CWC46_11810 (holB)
   03430 Mismatch repair
    CWC46_11810 (holB)
   03440 Homologous recombination
    CWC46_11810 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:serq03032]
    CWC46_11810 (holB)
   03400 DNA repair and recombination proteins [BR:serq03400]
    CWC46_11810 (holB)
Enzymes [BR:serq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CWC46_11810 (holB)
DNA replication proteins [BR:serq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CWC46_11810 (holB)
DNA repair and recombination proteins [BR:serq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CWC46_11810 (holB)
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2 HolB_lid DUF6587 KTSC
Other DBs
NCBI-ProteinID: AUH00428
UniProt: A0A2I5TJL6
Position
2590525..2591538
AA seq 337 aa
MEWYPWLNTAYRQLLGQYQSGRGHHALLIHALTGMGDASLVYALGRWLLCQHREGIKSCG
KCHSCQLMSAGTHPDWHVLRPEKGKQSLGVDAVRDVLETIYQHARQGGVKLIWLPLAESL
TEAAANALLKTLEEPPMETYFLLGCREPSRLLATFRSRCLYHYLDVPDETYSVQWLSSHY
PMDSQATLTALRLYAGAPLAAAKLLQPEHWKPRQTLCLTLSDCLIQRNFLPLVTPLNHED
VDDRIHWLSALLLDAIKCQHGAEEYLVNQDQLHLVQQLANTLDSDRLHHELRQWLQCRHQ
LRVITGVNRELLLTERLLNWEQNLSVTTLLPSHPFSV
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggaatggtatccgtggcttaataccgcttatcgtcaactgcttgggcagtatcagtca
ggacgtgggcaccatgcattgctgattcacgcattgactggcatgggcgatgcctcgctg
gtgtatgcgttaggtcgctggctattgtgtcagcatcgagaggggatcaaaagttgcggg
aaatgccattcttgccagttgatgagtgctggtacacatcctgattggcatgtgctccgt
cctgaaaaaggaaagcagagtctgggtgtcgatgcagtacgtgacgtgctggagacaata
tatcagcatgcccgtcaggggggggtgaaactgatttggttaccgctggcagagtcatta
accgaagctgcggccaatgctttgctgaaaacgcttgaagagccaccgatggaaacctat
ttcttactgggatgcagagagccttctcgcttgttggccacctttcgcagccgttgttta
taccactatcttgatgtgccggatgaaacgtatagcgtgcaatggctgagtagtcactat
ccgatggacagtcaggcgacactgacggcgctgagattatatgccggtgcaccgctggct
gccgccaagctgttgcagcctgaacattggaaaccacggcaaacactgtgcctgacgttg
tctgattgtctgatacagcggaactttttgccattagttactccgttgaatcacgaagat
gttgatgatcgaattcactggttgtctgcattgttacttgatgccataaagtgtcagcat
ggggcagaggagtatctggttaatcaggatcagcttcatctggtgcaacaattggcgaac
acgctggacagtgatcgactacaccatgaactgcgtcaatggttacaatgccgtcatcag
ttgcgcgtcataaccggtgtgaaccgcgagttattgttaacagaacggctgctgaactgg
gaacaaaatctgtcggtaacaacgcttttgccatcccatccattttctgtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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