KEGG   Serratia sp. SCBI: SERRSCBI_03425Help
Entry
SERRSCBI_03425    CDS       T03314                                 

Gene name
murD
Definition
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
sers  Serratia sp. SCBI
Pathway
sers00471  D-Glutamine and D-glutamate metabolism
sers00550  Peptidoglycan biosynthesis
sers01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sers00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00471 D-Glutamine and D-glutamate metabolism
    SERRSCBI_03425 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SERRSCBI_03425 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sers01011]
    SERRSCBI_03425 (murD)
Enzymes [BR:sers01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     SERRSCBI_03425 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:sers01011]
 Precursor biosynthesis
  Amino acid ligase
   SERRSCBI_03425 (murD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Mur_ligase_M Mur_ligase_C NAD_binding_7
Motif
Other DBs
NCBI-ProteinID: AIM20313
Position
775617..776936
Genome map
AA seq 439 aa AA seqDB search
MADYQGRKVVIIGLGLTGLSCVDFFMARGVTPRVMDTRIAPPGLDKLPESVERHLGDLNQ
DWLLAADLIVASPGVALATPALSAAADAGVEIVGDVELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKAAGWAVGVGGNIGLPALSLLRQECQLYVLELSSFQLETTHSLRAAAATILNV
TEDHMDRYPFGLQQYRGAKLRVYENAAVCVVNADDALTMPVRGADERCVSFGADVGDYHL
NRQQGETWLRVRGEKVLNTREMKLTGRHNYTNALAALALADAVNIPRASSLKALTTFTGL
AHRFQLAWEHNGVRWINDSKATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLARYL
QGDNVRLYCFGRDGAQLAQLRPEVATLTETMEQAMRTIAGRVQPGDMVLLSPACASLDQF
RNFEVRGDEFARLAQELGG
NT seq 1320 nt NT seq  +upstreamnt  +downstreamnt
atggcagactatcagggtagaaaagtcgtcatcatcgggttgggcctcaccggcctgtcc
tgtgtcgatttcttcatggcgcgcggcgtgacgccgcgcgtgatggatacccgtatcgcg
ccgccagggttggacaaactgcctgaaagcgtggagcgccatctgggcgatctgaaccag
gactggctgctggcggcggatctgatcgtcgccagcccgggcgtcgcgctggcgaccccg
gcattgagcgccgcggctgacgccggcgtggaaatcgtcggcgacgtcgaactgttctgc
cgcgaggcgcaggcgccgatcgtggcgattaccggctccaacggcaagagcaccgtcacc
accctggtgggcgagatggcgaaagccgccggttgggcggtgggcgtgggcggcaatatc
ggcctgccggcgctgagcctgttgcgccaggaatgtcagctttatgtgctggagctgtcc
agcttccagctggaaacgacgcatagcctgcgggcggcggcggcgaccatcctgaacgtg
accgaagatcatatggatcgctatccgttcggcctgcagcagtatcgcggcgccaagctg
cgcgtgtatgaaaacgccgcggtgtgcgtggtgaacgcggacgatgcgctgaccatgccg
gtgcgcggcgccgacgaacgctgcgttagcttcggggcggacgtgggcgactatcacctg
aaccgtcagcagggcgaaacctggctgcgggtgcgcggtgagaaggtgctgaacacgcgc
gagatgaagctgaccggccgccacaactacaccaacgccctggcggcgctggcgttggcg
gatgcggtcaatatcccgcgtgcctccagcctgaaggcgttgaccaccttcaccggcctg
gcgcaccgcttccagctggcctgggagcacaacggcgtgcgttggatcaacgattccaaa
gccaccaacgtcggcagcaccgaagcggcactgaacggcctgcaggtggacggcacgctg
catctgctgctgggcggcgacggcaagtccgccgatttctcgccgctggcgcgctatctg
cagggcgacaacgtgcggctgtattgctttggccgcgacggcgcccagctggcgcagctg
cggccggaagtggcgacgctgaccgagaccatggagcaggcgatgcgcaccatcgccggc
cgcgtacagcccggcgatatggtgctgttgtcgccggcctgcgccagtctcgatcagttc
cgtaattttgaagtgcgcggcgatgagttcgcccgcctggcgcaggagcttggcggatga

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