KEGG   Ornithinimicrobium pratense: FY030_16140
Entry
FY030_16140       CDS       T06221                                 
Name
(GenBank) HDIG domain-containing protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
serw  Ornithinimicrobium pratense
Pathway
serw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:serw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FY030_16140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:serw03019]
    FY030_16140
Enzymes [BR:serw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     FY030_16140
Messenger RNA biogenesis [BR:serw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FY030_16140
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD Trypan_PARP tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: QFG70036
UniProt: A0A5J6V9W7
Position
complement(3521404..3523020)
AA seq 538 aa
MPAPTDQTDAALLLRALRHLTPTLPLLTEIGERFATAGHEVALVGGPVRDAFLGRASPDL
DFATSASPDQIEQVLQGWAQTTWDVGRDFGTIGARRGRHHLEFTTYRADAYDASSRKPVV
AFGDNLEEDLVRRDFTVNAMALRLPELTFVDPHGGLTSLAGRVLRTPHTPQISFGDDPLR
MMRAARFAAQLGMVPAPEVLEAMRGMAPRLAIVSAERVRDELVKLILAPDPRAGLEVMVL
TGLADEVLPELPALRLEVDEHHRHKDVYEHSLTVLEQAIALEDPPVDAQVATDPTADPDT
DPDKDLDKDLDADLDADLDADLDAGPDAEREAEPDPDVVPGPDLVLRLAALLHDIGKPPT
RRFEPGGGVSFHHHEIVGAKMTRARLRALRFDKETVRSVSRLVELHLRFHGYGGGEWTDS
AVRRYITDAGPLLGRLHKLTRSDCTTRNRRKAARLAASYDDLERRIERLRQEEELSAVRP
DLDGHQIGEILGIRPGPVLGRAYKHLLAVRLDQGPLGWEAARDELLRWWAEQPESGDG
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgcccgcacccaccgaccagaccgacgccgcgttgctcctgcgcgccctgcgccacctg
accccgacgctgccgctgctcaccgagatcggtgagcgcttcgccacagccgggcacgag
gtcgccctcgtcgggggcccggtgcgggacgccttcctgggccgcgcctcacccgacctc
gacttcgccacctccgcctcacccgaccagatcgagcaggtgctgcagggctgggcacag
accacgtgggacgtgggccgcgacttcggcaccatcggcgcccgccggggcaggcaccac
ctggagttcaccacctaccgggccgacgcctacgacgcctcctcacgcaagccggtggtc
gccttcggcgacaacctggaggaggacctggtccggcgcgacttcaccgtcaacgcgatg
gccctgcgcctgcccgagctgaccttcgtcgacccgcacgggggactgaccagcctggcc
ggacgggtgctgcgcacgccgcataccccccaaatctccttcggcgacgacccgctgcgg
atgatgcgggcggcgaggttcgccgcccagctcggcatggtgcccgcacccgaggtgctg
gaagccatgcggggtatggcgccccgcctggcgatcgtgtccgccgagcgggtgcgcgat
gagctggtcaagctcatcctcgcccccgacccccgtgccggcctggaggtcatggtcttg
accggtctggccgacgaggtgttgcccgagctgcccgcgctgcgcctggaggtggacgag
caccaccggcacaaggatgtctacgagcacagcctcaccgtcctggagcaggccatcgcc
ctggaggacccgccggtggacgctcaggtcgccaccgaccccaccgcggaccccgacaca
gaccccgacaaagacctcgacaaagacctcgacgcagacctcgacgcagaccttgacgca
gaccttgacgcgggcccggacgcggagcgcgaggccgagccggaccccgacgtggtcccc
ggccccgacctggtcctgcgcctggccgcgctgctgcacgacatcggcaagccgcccacc
cgtcgcttcgagccggggggcggggtcagcttccaccaccacgagatcgtcggggccaag
atgacccgcgcccggttgcgggcgttgcgcttcgacaaggagacggtccggtcggtctcg
cgcctggtcgagctgcacctgcgcttccacggctacggcggtggggaatggaccgacagc
gcggtgcgtcgatacatcaccgacgccggcccgctcctgggccggctgcacaagctcacc
cgctccgactgcaccacccgcaaccgccgcaaggcggcccgcctcgcggccagctacgac
gacctggagcgccggatcgagcggctgcggcaggaggaggagctcagcgcggtccggccc
gacctggacgggcaccagatcggtgagatcctgggcatccggccgggtcccgtgctcggc
cgtgcctacaagcacctgctggccgtgcgactcgaccagggtcctctcgggtgggaggcc
gcccgcgacgagctgctgcggtggtgggccgagcagccggagtcgggggatgggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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