KEGG   Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_19110
Entry
CFSAN001921_19110 CDS       T02737                                 
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
  KO
K12541  ATP-binding cassette, subfamily C, bacterial LapB
Organism
setc  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:setc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    CFSAN001921_19110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:setc02000]
    CFSAN001921_19110
   02044 Secretion system [BR:setc02044]
    CFSAN001921_19110
Transporters [BR:setc02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    CFSAN001921_19110
Secretion system [BR:setc02044]
 Type I secretion system
  Adhesin protein transporter
   CFSAN001921_19110
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N AAA_21 DUF2813 RsgA_GTPase QCR10 AAA_29 Phage_holin_6_1
Other DBs
NCBI-ProteinID: AGQ69438
Position
complement(3926398..3928464)
AA seq 688 aa
MDKKLEPYYLSAETALSIVSKKFNIKIDIKEDDINLRFKKYDRNNTDDSIQMKNFFLSLG
LSLQDILFNNGEDLLNEPMPILLLTPEMKWMVCVSGGQKIKLVNARGELCYVEIEDEYLK
ELSAFSILPLNKVVDSIRVKNIIKNSLSMNKIFYTKYFFSSLFMAIFALTIPVFSNLFYD
KLVPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDIAFLEAVLYSKK
KNGRSMSSAFVLWNEFQKIKPVLLNSIFQRIADIPIFIIFLIVIYVNLGLVVIVPITMFI
VSIIISLVNHHYTNELMNKQKEGQKNRNIFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQ
SYLNLKIRKLNLIYQSILGSMSSITQITIMVIAFFMVIKGDVTTGAIVSSVIVSGRISGI
ISNFSSTLISILSAEKTGKDLLSFFDEDQAEKTPALQSISKCNGDISIRGVSYQYDAQSP
MIINRLSIDIPAGQRVAVVGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNFFS
QHLSVVTTHDVLFTGTIESNFALKPQNDRGRVLKALQLANCGFILQHPMGLKFPVNFMAK
NLSSGQQQQLLLARSLSSDASVFLWDEPTSNLDENTEKQIFDNLDEFIHGKTLIMVTHRR
YLIKYFDRVLVMKGGKIIRDCSPDKLLM
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggataaaaaactagaaccttattatttaagtgcggaaacggcattatctatagtgtct
aaaaaattcaacataaaaattgacatcaaagaggatgatataaatttaagatttaaaaag
tacgacagaaataacactgacgactctatacaaatgaagaatttctttttgtcgttaggg
ctttctctacaggatatattatttaataatggtgaggatttactaaatgagcctatgccg
attttactattaacaccagaaatgaagtggatggtgtgtgtgagtggcgggcaaaaaata
aagttggtaaacgcgcgcggtgaactctgttatgttgaaattgaagatgaatatttaaaa
gagttatctgcatttagtatactacctttaaataaagttgttgatagtataagagtaaaa
aatatcataaaaaactctttatcgatgaacaagattttttatactaaatactttttttca
tctctttttatggcaatttttgcgttaactatcccagtatttagtaatctgttctatgat
aagcttgttccaagcgcttcggtttcatctttatttggcgtggctataattgttgctgta
tttattgtttttgagtttatccttcgtacttcgaaagatatttatcagtctatcacagca
aggcaggatgacgtcgatattgatatcgcatttcttgaagcggtactttatagtaaaaag
aaaaatggcagatccatgtcatcagcatttgtgctatggaatgagtttcagaaaattaaa
cccgttttattaaactcgatctttcaacgtatagccgatattccaatatttattatattt
ctcattgttatatatgtaaatttaggtctggttgttattgtacctattaccatgtttatc
gtctctattattatttccctcgttaaccaccattatactaatgagttaatgaacaaacaa
aaagaaggacagaagaacaggaatatttttatctcagaagttttcttatctattaaaatg
atccataccttaaataatcaaggtttactttttgattgggttaatacatcaaatgaacag
tcgtatcttaacctgaagataaggaaattaaatcttatctatcaatctatattggggagt
atgtcatctattacccaaataactattatggtaatagccttttttatggtaatcaagggt
gatgttactactggcgcaattgtttcatctgtcattgtctctggccgtatttccgggatc
atttcgaatttttcttctacattaatctctattttatcagcagaaaaaaccggtaaggat
ctgctttctttttttgatgaagatcaggcagaaaaaacaccggcattacagtcaatatca
aagtgcaatggcgatatctctatccggggcgtgagttatcagtatgatgctcaatctccg
atgattattaaccgactgtctatagacatacctgcggggcaacgtgtcgcggtggtaggc
gaatgcggagcaggaaaaagctcattactgggaatgctatctggctacctttcgccaaca
gacggtgccattttatatgatggatataacttaggacatttatcgcagaactttttttct
cagcatttaagcgtggtgacgacacatgatgttttattcaccggaaccattgaaagtaat
ttcgcgttaaaaccgcaaaacgacaggggccgggtactcaaggcgcttcagctggcgaac
tgtggttttatcttgcaacatcctatggggctgaagtttccggtgaattttatggctaaa
aacctgtcatccggacagcagcagcagttattattagcacgtagtctgagtagtgacgcc
agcgtctttttatgggatgaaccaacatcaaatctggatgagaataccgagaagcaaatt
tttgataacttagatgagtttattcatgggaaaacgttgatcatggtgacgcatcgtcga
tatctgataaagtattttgaccgggtcctggtaatgaaaggtggaaaaataatccgtgat
tgttctccggataaattattaatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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