KEGG   Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_21745
Entry
STU288_21745      CDS       T02639                                 
Symbol
groEL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:setu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STU288_21745 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:setu03019]
    STU288_21745 (groEL)
   03110 Chaperones and folding catalysts [BR:setu03110]
    STU288_21745 (groEL)
   03029 Mitochondrial biogenesis [BR:setu03029]
    STU288_21745 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:setu04147]
    STU288_21745 (groEL)
Enzymes [BR:setu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     STU288_21745 (groEL)
Messenger RNA biogenesis [BR:setu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     STU288_21745 (groEL)
Chaperones and folding catalysts [BR:setu03110]
 Heat shock proteins
  HSP60 / Chaperonin
   STU288_21745 (groEL)
Mitochondrial biogenesis [BR:setu03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    STU288_21745 (groEL)
Exosome [BR:setu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   STU288_21745 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   STU288_21745 (groEL)
  Exosomal proteins of breast cancer cells
   STU288_21745 (groEL)
  Exosomal proteins of colorectal cancer cells
   STU288_21745 (groEL)
  Exosomal proteins of bladder cancer cells
   STU288_21745 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1 V18-19
Other DBs
NCBI-ProteinID: AGK11937
Position
4569990..4571636
AA seq 548 aa
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIADLKGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGAAGGMGG
MGGMGGMM
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccgaaaggccgtaacgtggttctg
gataaatctttcggtgcgccgactatcactaaagatggtgtttccgtagcgcgtgaaatc
gaactggaagacaagtttgaaaacatgggcgcgcaaatggtgaaagaagttgcctctaaa
gcgaacgatgctgcaggcgacggcaccaccaccgcgaccgtactggcgcagtccatcatt
accgaaggcttgaaagccgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagcggttgctgcggcggttgaagagctgaaagccctgtccgtaccgtgctccgac
tctaaagcgattgctcaggtaggtactatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgcggaagcgatggataaagtcggtaaagaaggcgtcatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagtttgaccgcggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagagctggaaagcccgttcatc
ctgctggctgataagaaaatctccaacatccgcgaaatgctgccggttctggaagccgtt
gcaaaagcaggcaaaccgctgctgatcatcgctgaagatgttgaaggcgaagcgctggct
accctggttgttaacaccatgcgtggcatcgtgaaagtggctgctgttaaggcacctggc
ttcggcgatcgtcgtaaggcgatgctgcaggatatcgctaccctgaccggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggcg
aaacgtgttgtgatcaacaaagacaccaccaccatcatcgatggcgtgggtgaagaagct
gccatccagggccgtgttgctcagatccgtcagcagattgaagaagcgacctccgactac
gatcgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcggttatcaaa
gttggcgctgcgaccgaagttgaaatgaaagagaagaaagcccgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggcgttgcgctgatc
cgcgttgcttctaaaattgctgacctgaaaggccagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagctccgctgcgtcagatcgtgctgaactgcggcgaa
gagccgtctgttgtcgctaacaccgttaaaggcggcgacggtaactacggttacaacgca
gcaactgaagaatacggcaacatgatcgatatgggtatcctggacccaaccaaagttacc
cgttctgcgctgcagtacgctgcttctgtggctggtctgatgatcactaccgagtgcatg
gtgaccgacctgccgaaaagcgatgctcctgatttaggcgctgctggcggcatgggtggt
atgggtggtatgggcggcatgatgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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