KEGG   Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_24510
Entry
STBHUCCB_24510    CDS       T01741                                 
Name
(GenBank) Outer membrane usher protein fimD
  KO
K07347  outer membrane usher protein
Organism
sex  Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    STBHUCCB_24510
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sex02000]
    STBHUCCB_24510
   02044 Secretion system [BR:sex02044]
    STBHUCCB_24510
   02035 Bacterial motility proteins [BR:sex02035]
    STBHUCCB_24510
Transporters [BR:sex02000]
 Other transporters
  Pores ion channels [TC:1]
   STBHUCCB_24510
Secretion system [BR:sex02044]
 Chaperone-usher system
  Type 1 pilus assembly protein
   STBHUCCB_24510
Bacterial motility proteins [BR:sex02035]
 Pilus system
  Fimbrial proteins
   STBHUCCB_24510
SSDB
Motif
Pfam: Usher PapC_N PapC_C
Other DBs
NCBI-ProteinID: AEZ46120
Position
complement(2377284..2379896)
AA seq 870 aa
MKKTTWFAGRFPGYVSPLSGVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEK
GNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGAGDKSGGLMPCFTPERIKRLGVNTAVF
PVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPA
ALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWSYSKGDGYHSQRWNNIGTWVQ
RAIIPLKSELVMGDSHTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKL
TIRQNGYVIYQSYVPPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQRE
GRVKYDLVAGDFRSGNSQQSSLFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGQNL
GDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDD
VAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGNYGSLYLSGSQQ
NYWNTADTNTWYQLGYASGWQGISYSLSWSWSESVGISGADRILAFNMSVPFSVLTGRRY
ARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSTNGHSGSASAS
WQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHTDGITFSQPLGDTNVLIKAPGAKGVRIE
NQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDT
RIGVRAIITARLGGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKN
ARCIAPYALAEDSLKQAITIASATCIRPSS
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgaagaagacaacctggtttgcagggcgatttcccggctatgtatcaccgttaagcggc
gtggcgctgtcggtgttggcagctctgtgtccgctgacgagccgcggcgaaagttatttc
aaccctgcgtttttgtcggcggataccgcgtccgtggcggatttatctcgctttgaaaaa
ggtaatcatcagcctcccggtatttaccgggtggatatctggcgtaacgacgaattcgta
gcgacgcaggatattcgttttgaggcgggcgccgtgggcgccggcgataaatccggcggc
ctgatgccttgttttacaccggagaggattaaacggctgggcgtgaataccgcggtgttc
cctgtctcagataaaggcgtcgataccacgtgtattcaccttcctgagaaaatcccgggc
gcggaggtcgcgttcgatttcgcgtcgatgcgcttaaacattagcttgccgcaggcgtca
ttgctcaacagcgcgcgtggctatatcccgccggaagagtgggatgaagggatacccgcc
gcactcattaattacagttttaccggtagccgcggaacagacagcgatagctattttttg
agtctgctgagcgggttgaactatggcccctggcggctgcgtaataacggagcctggagc
tattcgaaaggggacggctatcattcgcaacgctggaacaacattggcacctgggtacag
cgcgccatcattccgctaaaaagcgaactggtcatgggggacagccataccgggaacgat
gttttcgacagcgtcggctttcgcggagcgcggctgtactcttctgacaatatgtatccc
gatagcctgcagggctacgcccccacggtcagagggatcgcccggacggcggcaaagctg
acgatacgacagaacgggtatgttatctaccaaagctatgtgccgccgggcgcgtttgcg
attaccgatcttaatcctacctcttccagcggcgaccttgaggtgacggtagatgaaaaa
gacggtagccaacaacgttacacggtgccttactctaccgttccgctattgcagcgtgag
ggcagggtgaagtatgacctggtggccggggattttcgcagcggcaatagtcagcagtct
tcgctattctttttccagggaacggtgattgccggcctgcctgcggggctgacggcttac
ggcggtacgcaacttgccgatcgttaccgtgctgtggtggtcggggcggggcaaaatttg
ggtgactggggggccgtgtcggtcgatgtcacacatgcgcgtagccaactggcagatgac
agcacccatcaggggcaatcgttgcgttttctgtacgccaaatcgctgaataattacggg
actaattttcaattgctgggttaccgctattccacgcgcggattttacaccctggatgat
gtggcataccgcagtatggaagggtacgactacgaatacgatagcgacggacgccgccat
aaagtgccggtggcgcagagctaccacaatctccgctacagcaaaaaaggccgctttcag
gtcaatatttcgcaaaatctggggaattacgggtcactgtatctttccggcagtcaacaa
aattactggaatacggcggataccaatacctggtatcaactgggatacgccagtggatgg
caaggcataagttattcgctgtcatggtcgtggagcgagtcggtggggatctcaggcgcc
gaccgcattctggcattcaatatgtccgttccgtttagcgttctgaccggacggcgctat
gcgcgcgacactattcttgatcgtacttatgccacgtttaacgccaaccgcaaccgcgac
ggcgacaatagctggcagaccggtgtgggcggcacgcttctggaaggacgtaatctgagc
tacagcgtgacgcaggggcgtagcagtaccaatggtcatagcggcagcgccagcgctagc
tggcaggcgacgtatggcacgctgggcgtgggatataactacgatcgcgatcagcatgac
tataactggcaactttccggcggcgtggtcggtcatacggatggtattacgtttagccaa
ccgttgggcgataccaatgtcttgattaaagcgccgggagcgaaaggcgtgcgcatcgaa
aaccagaccggcgtgaaaacggactggcggggctatgcggtaatgccctacgccacggta
tatcgctataaccgcgtcgcgttagataccaacacgatggacaaccataccgatgtcgaa
aataacgtcagcagcgtggtgccgactgaaggcgcgctggtgcgggctgcttttgatacg
cggataggcgtaagggcaatcattaccgcgaggcttggcggacgtccgttaccgtttggc
gcgatagtacgagaaaccgccagcggcattaccagcatggtcggcgatgacggacaaatt
tatctgagcggcttgccgctaaaaggtgaactgttcatccagtggggagaggggaaaaac
gcgcgttgtatcgccccttacgccctggcggaggatagcctgaagcaggcgattacgata
gccagcgcgacctgtatccgtccgtcgtcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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