KEGG   Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_0259
Entry
SL1344_0259       CDS       T01724                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sey  Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Pathway
sey03030  DNA replication
sey03430  Mismatch repair
sey03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sey00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SL1344_0259 (dnaQ)
   03430 Mismatch repair
    SL1344_0259 (dnaQ)
   03440 Homologous recombination
    SL1344_0259 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sey03032]
    SL1344_0259 (dnaQ)
   03400 DNA repair and recombination proteins [BR:sey03400]
    SL1344_0259 (dnaQ)
Enzymes [BR:sey01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SL1344_0259 (dnaQ)
DNA replication proteins [BR:sey03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SL1344_0259 (dnaQ)
DNA repair and recombination proteins [BR:sey03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SL1344_0259 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 SDR-like HPIP
Other DBs
NCBI-ProteinID: CBW16361
UniProt: A0A0H3NHP2
Position
303393..304124
AA seq 243 aa
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDP
EAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPK
TNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILAEVYLAMTG
GQTSMTFAMEGETQRQQGEATIQRIVRQASRLRVVFASEEELAAHESRLDLVQKKGGSCL
WRA
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagcactgcaattacacgacagattgtcctcgataccgaaaccaccggtatgaatcag
ataggcgcgcactatgaaggtcacaagattattgagatcggtgcggttgaggtgataaac
cgtcgtctgaccggcaacaattttcatgtttacctgaagcccgatcgccttgtcgatcca
gaggcttttggcgtacacggtattgccgatgagtttctgctggataagccggtttttgct
gatgtggtcgatgagtttcttgattatatccgcggcgcggagctggtcatccataacgca
tcgttcgatatcggctttatggattatgagtttggtctgcttaaacgcgatattcctaaa
accaatactttctgcaaagttaccgacagcctggcgttggcgcggaaaatgttccccggc
aagcgtaacagccttgatgcactgtgttcgcgttatgagatagataatagcaaacgtact
ttgcacggcgcattgctcgatgcccagatccttgctgaagtgtatctggcgatgacgggc
ggacaaacgtccatgacgtttgcgatggaaggagagacgcaacggcagcaaggtgaggcg
accattcagcgaatcgttcgccaggccagccggttacgggtcgtttttgcctctgaggaa
gagctggctgcgcatgaatcgaggcttgatctggtgcagaaaaagggcggaagttgcctt
tggcgggcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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