KEGG   Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_2972
Entry
SL1344_2972       CDS       T01724                                 
Symbol
recB
Name
(GenBank) exonuclease V subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
sey  Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Pathway
sey03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sey00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SL1344_2972 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sey03400]
    SL1344_2972 (recB)
Enzymes [BR:sey01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SL1344_2972 (recB)
DNA repair and recombination proteins [BR:sey03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SL1344_2972 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11 AAA_25
Other DBs
NCBI-ProteinID: CBW19071
UniProt: A0A0H3NFL3
Position
complement(3167570..3171115)
AA seq 1181 aa
MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAV
SELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDT
ALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMNDAFMFRDIPFSPVKF
APRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALL
TNGDSSRPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESIALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPMDAAGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARALQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFE
ELDFTQPINPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVE
MEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMTNYDYERHFGGVIY
LFLRGVDGERPQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgaatgatgtcgccgagactcttgatcctctgcgcttgcccctgacaggcgagcgtttg
attgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcggcta
ctgctcggtttaggcggcagcgccgcatttccccgtccgttgaccgttgaagaactgctg
gtggtaacctttacggaggccgccactgaagagctgcgtgggcgaatccgcagtaatatc
catgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctttatgcccgcttg
ctggaagaaattagcgacaaaaagcaggccgcgcagtggttattactggcggaacgacaa
atggacgaggccgcggtctttaccatccacggtttttgccagcgtatgctcagcctgaac
gctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttgcgt
tatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatcgcg
caggtggtgtttgacgtgtggaagggaccgaaggcgctcttaaaggatatcgatcgttat
ctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggcatcg
cgccatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcggtt
agcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaaattcaaccgcggc
aatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagacgaaaaactat
caattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaagct
ggcggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaaccg
ctatcgattaaagatctggttcttacccgagcgctatcagagatccgtgaaacggtggct
caggaaaaacgccggcgcggcgagctggggtttgacgatatgctcagccgtttagatacc
gcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccggtg
gcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgtatc
tggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatttat
gcgtttcgtggcgcggatatctttacctacatgaaggctcgcagcgaagtgagcgcgcac
tatacccttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaagctg
ttcagtcagatgaatgacgcctttatgttccgcgatattcccttcagtccggtaaagttt
gcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatgacc
ctgtggctaatggagggggaaagctgcggttcgggcgattatcaaagttatatggcgcag
gtgtgcgccacgcaaattcgcgactggctgcgcgccgggcaaacgggcgacgcgctgctg
acgaacggcgattcgtcgcggcccgttcgcgcctcggatatcagcgtgttggtgcgcagc
aggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccttccgtctat
ctttcaaaccgcgacagcgtattcgaaacgctcgaagcgcaggaaatgctgtgggtgttg
caggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctctggcgacatcaatg
atgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggatgcg
gttgtcgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcctatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacggcgggaggt
gaacgtcggctgacggatattctgcatattagcgaactgttacaggaagccggttcgcag
ctggaaagcgaacatgcgctggtgcgttggctggcgcaacatatccttgaacccgatagc
aatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtcacc
attcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccatttc
cgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggtgctggacctt
agtcacgccgaagagagcatagcactggcggaagccgaacgcctggcggaagacctgcgc
ctactttatgtcgcgctgacccgtgcagtgtggcattgcagcctcggcgtcgcgccgctg
gtacggcgtcgcagcgataagaaaggcgagacggatgtgcaccaaagcgcgcttgggcga
ctcctgcaaaaaggcgaaccgatggatgccgcaggccttcgcgcctgtattgaggcgcta
tgcgacgaggatatcgtgtgtcgaacgccaggcaacacggataacgatcgctggcaaatt
gccgctgcatcgcatgcggaactcagcgccagagcgctgcaacgcctgctttatgatagc
tggcgcgtcaccagttattccggtttgcagcagcggggacatagcgtggcgcaagatctt
attcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggcaatg
acgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacagcctgtttgaa
gagcttgattttactcaaccgataaacccccaatgggtacaggaaaaactggagctgagt
ggttttgaaacgcgatgggagcccgtacttacccgctggctggacaccgtgttacacgtt
ccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtcgaa
atggagttttatctgccgattgcccagccgcttaccgccggagagctggatgcgttgatt
cgtcgatacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgcggc
atgttaaagggctttatcgacctggtgttccgttatgaagggcgctattacctgctcgac
tataaatctaactggctgggcgaggatagcgccgcttatacccagacggcgatggctgcg
gcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcaccgt
taccttcgtcatcgaatgacgaattacgactatgaacgccatttcggcggcgtcatctat
ctctttttacgcggggtggatggcgaacgtccgcagcagggtatttttaccactcgtcct
gcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggaggcg
caatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system