KEGG   Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_3604
Entry
SL1344_3604       CDS       T01724                                 
Symbol
lpfC
Name
(GenBank) outer membrane usher protein (LpfC)
  KO
K07347  outer membrane usher protein
Organism
sey  Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Pathway
sey02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sey00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SL1344_3604 (lpfC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sey02000]
    SL1344_3604 (lpfC)
   02044 Secretion system [BR:sey02044]
    SL1344_3604 (lpfC)
   02035 Bacterial motility proteins [BR:sey02035]
    SL1344_3604 (lpfC)
Transporters [BR:sey02000]
 Other transporters
  Pores ion channels [TC:1]
   SL1344_3604 (lpfC)
Secretion system [BR:sey02044]
 Chaperone-usher system
  Type 1 pilus assembly protein
   SL1344_3604 (lpfC)
Bacterial motility proteins [BR:sey02035]
 Pilus system
  Fimbrial proteins
   SL1344_3604 (lpfC)
SSDB
Motif
Pfam: Usher PapC_N PapC_C Big_6
Other DBs
NCBI-ProteinID: CBW19697
UniProt: A0A0H3NH92
Position
complement(3845430..3847958)
AA seq 842 aa
MTWTHLPLGNKTSRFTQSALALMIAGTLPAYAGTFNPRFLEDVPGIDQHVDLSMYESNKA
EHLPGKYRVSVVVNEKKMESRTLEFKAATEAQRAKMGESLVPCLSRVQLEDMGVRIDSFP
ALKMAPPEACVAFDDIIPQAASHFDFADQTLIMSFPQAAMKQTARGTVPESQWDEGVNAL
LVDYNFSGSNASYDAHDSETSYNSDSYYLNLRSGMNLGAWRLRNYSTWTRNDGNNTWDNI
GTSLSRAIVPLKSQLTLGDTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAK
SNAEVTVEQNNYVIYRTFVQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVA
LLQREGHLKYSLSAGEYRAGNYNSAEPKFGQLDAMYGLPYGFTVYGGAIFSDDYYSLAGG
LGKNFGYIGAISIDVTQAKSKLANEENSEGQSYRFLYSKSFNSGTDFRLLGYKYSTSGYY
TFQEATDVRSDADSSYSQYHKRSQIQGNVTQQLGAWGSVYFNVTQQDYWNDEGKQRSLNA
GYNGRIGRVNYSVAYTWTKSPEWDESDRLLSFSMSIPLGRVWSNYHLTTDQHGRTNQQLG
VSGTALEDHNLNYSVQEGYGSNGVGNSGSVNLDYQGGVGSASLGYNYNRDGQQVNYGLRG
GVIAHSEGITLSQPLGESMAIISAPGARGAHVINNGGVEVDWMGNAVVPYLTPYRETEVS
LRSDSLNNQVDLDTASVNVVPTRGAIVRARFDTRVGYRVLMNLTQANGKAVPFGATATLL
DTTKESSSIVGEDGQLYISGMPEKGALQVNWGKDQAQQCRVAFTLPEQQDNTGVVMANAV
CR
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgacatggacgcatcttcctctgggcaataagacctcgcgtttcacgcagtctgcgctt
gcgctgatgatagcgggtacgctccccgcgtatgcgggaacatttaacccgcgctttctg
gaggatgtgccgggtattgatcagcacgttgacctttcaatgtatgaatccaataaagct
gaacacctgccaggtaaataccgcgtctcggtggtggtcaacgaaaaaaaaatggagtct
cgcaccctggagtttaaggcagcgacagaggcgcagcgcgcaaaaatgggtgaatccctg
gtgccgtgcttaagtcgcgtgcagcttgaagatatgggcgtgcgtattgatagcttcccg
gcgctgaaaatggccccgcctgaagcctgtgttgcttttgacgacattattccccaggcc
gccagccatttcgactttgcagaccagaccctgatcatgagcttcccgcaggctgcgatg
aagcagacagcgcgcggtacggtgccagaatcgcagtgggacgaaggggtgaatgccctg
ctggtggattataacttttccggcagcaacgccagctatgacgcacacgacagtgaaacc
agctacaacagcgacagctactatctgaatctgcgcagcggtatgaacctgggggcatgg
cggttacgtaactatagcacctggacgcgaaacgacggtaacaacacatgggataacatt
ggcacatccttaagccgtgccattgtaccgctgaaatcacagctgacgttgggggatacc
tccactgccggtgatatttttgacagcgttcagatgcgcggtgtgcagttaacttccgac
gaagagatgctgcctgacagccagcgcgggtttgcgcccgtcatccggggtattgccaaa
agtaacgccgaagttaccgttgagcagaacaactacgttatttaccgtacgtttgttcag
ccgggtgcgtttgaaattaacgacctgtatccaacctcaaacagcggcgacctgacggtc
accattaaagaatcggacggcagtgagcagaagttcgttcagccgttctcctcggtggcg
ctcctccagcgtgaaggccatctcaaatacagcctttccgccggggaataccgtgccggg
aactataacagcgccgagccgaaattcgggcagcttgatgccatgtacggcctgccgtat
ggctttaccgtttacggtggtgcgatcttctctgacgactattactcgctggcgggagga
ttaggtaaaaacttcggttatatcggcgcgatctccatcgatgtaacccaggcaaaaagc
aagctggcaaatgaggagaattcggaaggtcagtcttatcgtttcctctactccaagagc
tttaacagcggtacagatttccgtctgctgggttacaagtattcgaccagcggctattac
accttccaggaagcgacggatgtgcgcagcgatgcggacagctcttatagccagtaccac
aaacgtagtcagattcagggcaacgtgacgcagcaactgggcgcctggggctcggtctat
tttaacgtcacgcagcaggactactggaacgatgaaggtaaacagcgttcgctgaatgcc
ggttataacggccgtattggccgcgtgaactacagcgttgcttacacctggacgaaaagc
ccggagtgggatgagagcgatcgtttactgtcattctccatgtcgattccactgggacgc
gtgtggagtaactaccacctcacgaccgatcagcatggccgaaccaaccagcagttaggg
gtgagcggcaccgcgctggaagaccacaacctgaactatagtgtgcaggaaggctacggc
agcaacggcgtgggtaacagcggcagcgtgaacctggattaccagggcggcgtgggtagc
gccagcctgggttacaactacaaccgtgacggccagcaggtgaactacggtttgcgcggc
ggtgtgatagcccatagcgaaggtatcactctttctcaaccgctgggtgaatccatggcc
attatctccgcgccgggcgcgcgcggcgcgcacgtgatcaacaacggtggtgtggaagtg
gactggatgggtaatgcggtcgtaccttaccttactccgtaccgtgaaacggaagtctca
ctgcgaagcgacagcctgaacaaccaggttgacctggataccgcctccgtcaacgtagtg
ccgacacgcggcgcgattgttcgtgcccgcttcgatacccgagtgggctatcgtgtgctg
atgaatctgacgcaggccaatggcaaagcggtgccgtttggtgctaccgccacgctgctg
gataccacaaaagagtccagcagcattgtgggtgaagacggtcagctttatatcagcggg
atgccggagaaaggtgcccttcaggtgaactggggtaaagaccaggcacagcaatgccgc
gtggcgtttacgctgccggaacaacaggataataccggcgtggtgatggcgaatgccgtc
tgccggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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