KEGG   Streptomyces pratensis: Sfla_0865
Entry
Sfla_0865         CDS       T01647                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sfa  Streptomyces pratensis
Pathway
sfa03030  DNA replication
sfa03410  Base excision repair
sfa03420  Nucleotide excision repair
sfa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sfla_0865
   03410 Base excision repair
    Sfla_0865
   03420 Nucleotide excision repair
    Sfla_0865
   03430 Mismatch repair
    Sfla_0865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfa03032]
    Sfla_0865
   03400 DNA repair and recombination proteins [BR:sfa03400]
    Sfla_0865
Enzymes [BR:sfa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Sfla_0865
DNA replication proteins [BR:sfa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Sfla_0865
DNA repair and recombination proteins [BR:sfa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Sfla_0865
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Sfla_0865
   MMR (mismatch excision repair)
    DNA ligase
     Sfla_0865
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Sfla_0865
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT PTCB-BRCT HHH UPF0758_N Cas_Csd1 DNA_ligase_ZBD BRCT_2 DUF3138
Other DBs
NCBI-ProteinID: ADW02323
UniProt: A0A8D3WCX2
Position
complement(997080..999176)
AA seq 698 aa
MTTNSAGPLADTAAYAAAVEEAERAAAAYYTAGESTLDDDAYDRLVRAIAAYEEEHPQEV
LDASPTGKVAGGAVSGDVPHTVPMLSLDNVFSAEQFVTWTASVERRIGRPVAAWSVEPKL
DGLAVAARYRQGVLEQLITRGDGTAGEDVSHAIGTVLGLPERLGAPATLEIRGEILMTTE
QFEAANAVRTEHGAAPFANPRNGAAGTLRAKDRPYRVEMTFFAYGALALPDSGELTDTLA
GLPHSEVLEYVAGIGVHTAADTAVAPRTVTTVEEVQAGVEDIAALRASLPFGIDGIVIKA
DLAADQRDAGSGTRAPRWAIAYKLPAVEKVTRLLGVEWNVGRTGIIAPRAVLEPVEIDGS
TVSYATLHNPADITRRDLRLGDHVMVYKAGDIIPRIEAPVAHLRTGEEQPIEFPEACPRC
GSEIDASEQRWRCTRGRDCRLVASISYAAGRDQLDIEGLGTTRVVQLVDAGLVQDFADLF
TLERDQLLSLDRMGETSTDNLLAAIGAAASRPLSRVFCALGVRGTGRSMSRRIARHFASM
DRIAAADVEALQQVDGIGKEKAAAVVRELQELAPLIGKLVAAGVNMTEPGATPPPEPGAA
QEGEAEESATSGLPLAGMTVVVTGAMTGALEKLSRNEMNELIERAGGKSSSSVSKRTSLL
VAGEKAGSKRTKAEDLGVRIAAPEEFAELVQAHLAVEV
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgacgacgaactcagctggtccgctcgccgacacggccgcctacgcagccgcggtggaa
gaggccgaacgcgccgcggccgcgtactacaccgcaggtgagagcacgctcgacgacgac
gcgtacgaccggctggtgcgcgcgatcgccgcatacgaggaggagcacccgcaggaggtg
ctggacgcctcgccgacgggcaaggtcgccggtggggcggtctcgggcgacgtgccgcac
accgtgccgatgctctcgctggacaacgtgttctccgccgagcagttcgtcacctggacc
gcttccgtggaacggcgtatcgggcggcccgtcgcggcctggagcgtggagcccaagctc
gacggtctggccgtcgccgcgcgctaccggcagggcgtactcgagcagctgatcacccgg
ggcgacgggacggccggcgaggacgtctcccacgcgatcgggacggtgctggggctcccc
gagcggctcggcgctcccgccacgctcgagatacgcggcgagatcctcatgaccaccgag
cagttcgaggcggcgaacgcggtgcgcacggagcacggcgccgcccccttcgccaacccg
cgcaacggcgcggccggcaccctgcgggccaaggaccgcccctaccgcgtggagatgacg
ttcttcgcgtacggcgcgctcgcgctgcccgactccggcgaactgacggacaccctggcc
ggactcccgcacagcgaggtcctggagtacgtcgccgggatcggggtgcacaccgccgcc
gacaccgcggtcgccccgcgcaccgtgaccacggtcgaggaggtccaggcgggggtggag
gacatcgcggcgctgcgcgcctcgctgcccttcggtatcgacggcatcgtgatcaaggcg
gacctggccgccgaccagcgtgacgcgggctccgggacgcgcgcgccccgctgggccatc
gcgtacaagctcccggccgtcgagaaggtcacccggcttctgggcgtcgagtggaacgtc
ggcaggaccggcatcatcgcgccgcgcgccgtgctggagcccgtcgagatcgacgggtcc
accgtcagctacgccacgctgcacaaccccgcggacatcacacgccgggatctgcgactg
ggcgaccacgtgatggtctacaaggcgggcgacatcatcccccgcatcgaggcccccgtc
gcgcacctgcggacgggggaggaacagccgatcgagttccccgaggcctgtccccggtgc
ggttcggagatcgacgcgagcgagcagcgctggcgctgcacccggggccgcgactgccgc
ctggtcgcctccatctcctacgcggcgggccgtgaccagctggacatcgaagggctcggc
accacccgggtcgtccagctcgtcgacgccggtctcgtccaggacttcgccgatctcttc
acgctggagcgcgaccagctgctctccctggacaggatgggggagacctcgacggacaac
ctgctggcggccatcggggccgccgcgagccgtccgctgtcccgcgtcttctgtgcgctc
ggcgtgcgcggcacgggccgctccatgtcccggcggatcgcccgccacttcgcctcgatg
gaccggatcgccgccgccgacgtggaggcgctgcaacaggtcgacggcatcggcaaggag
aaggccgcggcggtcgtcagggaactgcaggagctcgcgccgctgatcggcaagctggtg
gccgccggggtcaacatgacggagcccggtgccaccccgccgccggagcccggggccgcg
caggagggggaggccgaggagtccgcgacatccggactgccgctcgccggtatgacggtc
gtggtgaccggagccatgaccggggccctggagaagctctcgcgcaacgagatgaacgag
ctgatcgagcgcgccggaggcaagtcctcctccagcgtctccaagcgcaccagcctgctc
gtcgccggggagaaggcgggttccaagcggaccaaggccgaggatctcggtgtccggata
gccgcacccgaggaattcgccgagctcgtgcaggcgcatctcgccgtggaggtgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (32)   

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