KEGG   Streptomyces pratensis: Sfla_3940
Entry
Sfla_3940         CDS       T01647                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
sfa  Streptomyces pratensis
Brite
KEGG Orthology (KO) [BR:sfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfa03021]
    Sfla_3940
Transcription machinery [BR:sfa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Sfla_3940
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_28 HTH_17 MarR_2 HTH_23 ADSL_C
Other DBs
NCBI-ProteinID: ADW05356
UniProt: A0A8D3WHR7
Position
4556872..4557459
AA seq 195 aa
MRKDAAVADDRPHRARHRSAVRRPPADVPDEELVRALYREHAGPLLAYVLRLVAGDRQRA
EDVVQETLIRAWKNAGSLNRATGSVRPWLVTVARRIVIDGHRSRQARPREVDPSPLEVIP
AEDEIDKALWLMTLSDALDDLTPAHREALVETYFRGRTVNEAAEILGVPSGTVRSRVFYA
LRSMKLALEERGITA
NT seq 588 nt   +upstreamnt  +downstreamnt
gtgcgcaaggatgcggccgtggccgatgaccgtccgcacagggctcgacatcgcagtgcg
gtgcgccgccctcccgccgacgttcccgacgaggagctggtgcgggcgctctaccgcgaa
cacgcgggcccgctgctcgcctacgtgctccgcctcgtcgcgggggaccggcagcgggcc
gaggacgtggtgcaggagacgctcatccgtgcctggaagaacgccggttcgctcaaccgg
gccaccggttcggtccgcccctggctggtgacggtcgcacggcgcatcgtcatcgacggc
caccgcagccggcaggcccggccgcgcgaggtcgatccgtcgccgctggaggtcattccc
gcggaggacgagatcgacaaggcgttgtggctgatgacgctctcggacgcactcgacgat
ttgaccccggcccaccgggaagcattggtcgagacctacttcagaggccgtacggtcaac
gaggcggccgagatcctgggcgtccccagcgggaccgtgcggtcccgggtgttctacgca
ctgcgttccatgaagctcgcactcgaggagagggggatcacggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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