KEGG   Streptomyces microflavus: SFUL_250
Entry
SFUL_250          CDS       T02650                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
sfi  Streptomyces microflavus
Brite
KEGG Orthology (KO) [BR:sfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfi03016]
    SFUL_250
Enzymes [BR:sfi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     SFUL_250
Transfer RNA biogenesis [BR:sfi03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    SFUL_250
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AGK75234
UniProt: N0CJQ4
Position
272935..273555
AA seq 206 aa
MNEPPEAVTEPAADEREQATTIRVFLALAPPDDAKDELARALRPAYEAYPRLRWNRIEDW
HITLAFLGELPVTTVPLLVPPLAELSARRRPLRLALHGGGHFDERVLWSGIEGDLEGLHQ
LATDVRAVVRACGVPFPERPLRPHLTLARSRRGDHSAAVEIAAGLAAFSGREWEAERLHL
VGSNIGRGPGPIHYRDVEAWRFGHGA
NT seq 621 nt   +upstreamnt  +downstreamnt
gtgaacgaaccgcccgaagccgttaccgagcccgctgcggacgagcgtgagcaggccacg
acgatccgcgtgttcctggcactcgccccgcccgacgacgccaaggacgaactggcgcgg
gcgctgcgtccggcctacgaggcgtacccgcgcctgcggtggaaccggatcgaggactgg
cacatcaccctggcgttcctcggcgaactcccggtcaccaccgtcccgctcctggtgccc
ccgctcgccgaactctcggcgcggcggcgacccctgcggctggcgctgcacgggggcggg
cacttcgacgagcgggtcctgtggagcgggatcgagggcgacctcgaaggactgcaccag
ctcgccaccgacgtacgcgccgtcgtcagggcatgcggtgtccccttcccggagcggccg
ctgcggccccatctgacgctggcccgctcccgccggggcgaccactccgccgcggtggag
atcgccgcgggcctcgccgcgttctccggtcgtgagtgggaggccgaacggctccatctg
gtcggcagcaacatcggccgcggcccgggaccgatccactaccgggacgtcgaggcctgg
agattcggccacggagcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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