KEGG   Serratia ficaria: SAMEA4384070_0002
Entry
SAMEA4384070_0002 CDS       T06444                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
sfj  Serratia ficaria
Pathway
sfj03030  DNA replication
sfj03430  Mismatch repair
sfj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAMEA4384070_0002 (dnaN)
   03430 Mismatch repair
    SAMEA4384070_0002 (dnaN)
   03440 Homologous recombination
    SAMEA4384070_0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfj03032]
    SAMEA4384070_0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:sfj03400]
    SAMEA4384070_0002 (dnaN)
Enzymes [BR:sfj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAMEA4384070_0002 (dnaN)
DNA replication proteins [BR:sfj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAMEA4384070_0002 (dnaN)
DNA repair and recombination proteins [BR:sfj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAMEA4384070_0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: SNV78089
UniProt: A0A240A466
Position
1:1337..2437
AA seq 366 aa
MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS
QPHEAGATTVPARKFFDICRGLPEGAEIAVTLESERMLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPIGQQLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITANNPEQE
EAEEILDVSYDGTEMEIGFNVSYVLDVLNALKCEDVRLLLTDSVSSVQIEDGASQAAAYV
VMPMRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaaatttatcgttgaacgtgagcatctgctaaaaccgctgcaacaggtgagcagcccg
ctgggcggccgcccgacgctgccgattctgggtaacctgctgctgcaggtgacggaaggc
tccctgctgctgaccggtaccgatctggagatggagatggtggcgcgcgtcgccctgtcc
cagccgcatgaggcgggcgcgaccaccgtgcccgcgcgtaaattctttgatatctgccgt
ggcctgcccgaaggggcggagatcgccgtgacgctggaaagcgagcgcatgctggtgcgt
tccggccgcagccgtttttcgttgtccacgctgccggcggcggacttcccgaatctggac
gactggcagagcgaggtggaattcaccctgccgcaggcgacgctgaagcgcctgatcgaa
gccacccagttctcgatggcgcatcaggacgtgcgttactatctgaacggcatgctgttc
gaaaccgaaggcgaagagctgcgcaccgtcgcgaccgacggccaccgcctggcggtgtgt
tcgatgccgatcggccagcagttgccgtcgcattcggtgatcgtgccgcgtaaaggggtg
atggagctggtgcgtctgctggacggcggcgatacgccgctgcagctgcagatcggcagc
aacaacatccgcgcccacgtcggcgatttcatcttcacttccaagctggtcgacggccgt
ttccctgattatcgccgcgtattgccgaaaaaccccgacaaaacgctggaagccggctgc
gatctgctgaagcaggcgtttgcccgcgcggccattctgtcgaacgaaaagttccgcggc
gtgcgcctgtacgtgagccagaaccagctgaagatcaccgccaacaacccggagcaggaa
gaggcggaagagatcctggatgtcagctatgacggcaccgaaatggaaatcggcttcaac
gtcagctacgtgctcgacgtgttgaacgcgctcaagtgcgaagatgtgcgcctgctgctg
accgattcggtctccagcgtgcagatcgaagacggcgccagccaggcggcggcatacgtc
gtcatgccgatgcggttgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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