KEGG   Serratia ficaria: SAMEA4384070_0552
Entry
SAMEA4384070_0552 CDS       T06444                                 
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
  KO
K21636  ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
Organism
sfj  Serratia ficaria
Pathway
sfj00230  Purine metabolism
sfj00240  Pyrimidine metabolism
sfj01100  Metabolic pathways
sfj01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:sfj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SAMEA4384070_0552 (nrdD)
   00240 Pyrimidine metabolism
    SAMEA4384070_0552 (nrdD)
Enzymes [BR:sfj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.98  With other, known, physiological acceptors
    1.1.98.6  ribonucleoside-triphosphate reductase (formate)
     SAMEA4384070_0552 (nrdD)
SSDB
Motif
Pfam: NRDD Gly_radical ATP-cone UvrA_inter Zn_Tnp_IS91
Other DBs
NCBI-ProteinID: SNV86088
UniProt: A0A240AT98
Position
1:complement(593528..595666)
AA seq 712 aa
MKPVVIKRDGCQVPFDEARIAQAIERAALAAGVVDADYCATVARVVAQRMERRQHVDIHE
IQQAVENQLMAGEYKQLARAYIEYRHDRDVARELRGRLNQEIRGLVEQNNRALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYAPFFPMFNCMLIDL
KGMLTNGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVSESF
RKHREVAEQWQIPDAQGYAMARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTC
WESRLIQRSILKNRIAGLGKNRKTAVFPKLVFAICDGLNHQYGDPNYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGTYEENGELVHDGRNNIGVISLNLPRIALEAM
GDEARFWSLLDRRLLLAKKALMTRIARLEGIKARVAPILYMEGACGVRLKADDNIADIFK
NGRASISLGYIGLHETINALFGNGTHVYDDETLRAKAVAIVERLRAATDGWKAETGYGFS
LYSTPSENLCDRFCRLDTADFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ANGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYQCGFTGEFSCTSKGF
TCPKCGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLDNGRLG
NT seq 2139 nt   +upstreamnt  +downstreamnt
gtgaaaccagtagtgattaaacgggacggttgccaggtaccttttgacgaagcgcgcatc
gcgcaggcgattgaacgcgccgccctggcggccggggtggtcgacgccgactactgcgcc
accgtcgcccgcgtggtcgctcagcgcatggagcggcggcagcacgttgatatccatgaa
attcagcaggcggtggaaaaccagttgatggccggcgaatacaaacagctggcgcgcgcc
tacatcgaataccgccacgatcgcgacgtggcgcgcgagctgcgcgggcggctgaaccag
gagatccgcggcctggtggaacaaaacaaccgcgcgctgctgaacgaaaacgccaacaag
gacagcaaggtgatcccgacccagcgcgatctgctggccggcatcgtcgccaaacactac
gccaagcagcacatcctgccgcgcgacgtggtgctggcccatgagcgcggcgaaattcac
taccacgacctcgactacgcgccgttcttcccgatgttcaactgcatgctgatcgacctg
aaaggcatgctgaccaacggcttcaagatgggcaacgccgagatcgaaccgccgaagtcg
atctccaccgccaccgccgttaccgcgcagatcatcgcccaggtcgccagccatatttac
ggcggcaccaccattaaccgcatcgacgagatcctggcgcccttcgtcagcgaaagcttc
cgcaagcaccgcgaagtggccgaacaatggcagatcccggacgcgcagggctacgccatg
gcgcgcaccgagaaagagtgttacgacgccttccagtcgttggaatacgaggtcaacacc
ctgcacaccgccaacggccagacgccgttcgtcaccttcggcttcggcctcggcacctgc
tgggaatcgcgcctgatccagcgttcgatcctgaaaaaccgcatcgccgggctgggcaag
aaccgcaagaccgccgtgttccccaaactggtgttcgccatctgcgacggcctcaaccac
cagtacggcgatccgaactacgacatcaaacagttggcgctggagtgcgccagcaaacgc
atgtatccggacatcctcaattacgatcaggtggtgaaggtcaccggctcgttcaagacg
ccgatgggctgccgcagcttcctcggcacctacgaggaaaacggcgagctggtgcacgac
ggccgcaacaacatcggcgtgatcagccttaacctgccgcgcatcgcgctggaggcgatg
ggcgacgaggcgcgcttctggagcctgctcgatcggcgcctgctgctggcgaaaaaggcg
ctgatgacgcgcatcgcgcggctggagggcatcaaggcgcgggtggcgccgatcctctat
atggaaggcgcttgcggcgtgcggctgaaggccgacgacaacatcgccgacatcttcaag
aacggccgcgcctctatctcgctgggctatattggcctgcacgaaaccatcaacgcgctg
ttcggcaacggcacccacgtttacgacgacgaaactctgcgcgccaaggcggtggcgatc
gtcgaacggctgcgcgccgccaccgacggctggaaggcggaaaccggctacggcttcagc
ctgtacagcacgccgagcgaaaacctgtgcgaccgcttctgccggctggacaccgccgat
ttcggcgtggtgccgggcgtgaccgacaagggctactacaccaacagcttccacctcgac
gtggagaaaaaggtcaatccgtacgacaaactggacttcgaggcgccctatccgccgttg
gccaacggcggcttcatctgctacggcgaataccccaacctgcagcacaatttgaaggcg
ctggaagacgtgtgggactacagctacagccgggtgccttattacggcaccaacacgccg
atcgacgagtgctaccaatgcggcttcaccggcgagttttcctgcaccagcaagggcttc
acctgcccgaaatgcggcaaccacgagccgtccaaggtgtcggtcacccggcgggtgtgc
ggctacctcggcagcccggacgccaggccgttcaacgccggcaagcaggaagaggtgaaa
cggcgggtgaagcatctcgacaacgggcggctcggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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