KEGG   Serratia ficaria: SAMEA4384070_0860
Entry
SAMEA4384070_0860 CDS       T06444                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor rpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
sfj  Serratia ficaria
Brite
KEGG Orthology (KO) [BR:sfj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfj03021]
    SAMEA4384070_0860 (rpoS)
Transcription machinery [BR:sfj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SAMEA4384070_0860 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: SNV89070
UniProt: A0A240B0E0
Position
1:935338..936336
AA seq 332 aa
MSQNTLKVNELHDDADFDENGTEAESFDEKALVEEETSENDLAEEELLSQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
ADEKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQMQGLSIEALFRE
NT seq 999 nt   +upstreamnt  +downstreamnt
atgagccaaaatacgctgaaagttaacgagttacatgatgatgcggacttcgacgagaat
ggaactgaagctgagtcgttcgacgaaaaagcgctggtagaagaagagaccagcgagaat
gatttagcggaagaagagctgttgtctcaaggcgttacccaacgcgtattggatgcgacg
cagctctatctgggtgagatcggttattcgcccctgcttaccgcagaagaagaagtctat
tttgcgcggcgtgctctgcgcggtgacgtgccgtcccgccgccgcatgatcgaaagcaac
ctgcggctggtggtgaaaatcgcccgccgctacagcaaccgcggcctggcgctgctggat
ctgattgaagagggcaacctcggcctgatccgcgcagtggaaaagtttgacccggaacgc
ggtttccgtttctccacctacgcaacctggtggatccgccagacgattgaacgggcgatt
atgaatcaaacccgtaccattcgattgccgatccatatcgtcaaagaactgaatgtctat
ctgcgcaccgcgcgcgagctttctcacaaactggatcatgaaccgagcgctgaagagatt
gccgagcaactcgacaagccggttgatgacgtcagccgcatgttgcgcctgaatgagcgc
attacctcggtcgacaccccgctgggcggcgattctgagaaagcgctgctggatattctg
gccgacgagaaagacaacgggcctgaagacaccacgcaagacgatgatatgaaacaaagc
atcgtcaagtggctgtttgaactgaacgccaagcagcgtgaagtgttggcgcgccgtttc
ggcctgttgggctacgaagcggcgacgttggaagacgtgggccgggagataggcctgacg
cgtgaacgcgtccgtcagattcaggtagaaggtttgcgccgcctgcgcgaaattctgcag
atgcagggcctgagcatcgaggcgctgttccgcgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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