KEGG   Serratia ficaria: SAMEA4384070_3836
Entry
SAMEA4384070_3836 CDS       T06444                                 
Symbol
nrdE
Name
(GenBank) Ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sfj  Serratia ficaria
Pathway
sfj00230  Purine metabolism
sfj00240  Pyrimidine metabolism
sfj01100  Metabolic pathways
sfj01232  Nucleotide metabolism
Module
sfj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
sfj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:sfj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SAMEA4384070_3836 (nrdE)
   00240 Pyrimidine metabolism
    SAMEA4384070_3836 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfj03400]
    SAMEA4384070_3836 (nrdE)
Enzymes [BR:sfj01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SAMEA4384070_3836 (nrdE)
DNA repair and recombination proteins [BR:sfj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SAMEA4384070_3836 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: SNW04375
UniProt: A0A240C8T4
Position
1:4055707..4057851
AA seq 714 aa
MATTELTRPAAGALDYHSLNAMLNLYDAEGRIQFDKDRLAARHYFLQHVNQNTVFFHNLE
EKLRYLVEEGYYEPQVLAQYDFPFIKQLFQQAYAKKFRFETFLGAFKYYTSYTLKTFDGK
RYLERYEDRVCMVALTLAAGDTRLAQDLVEEMISGRFQPATPTFLNCGKQQRGELVSCFL
LRIEDNMESIGRAVNSALQLSKRGGGVAFLLTNIREVGAPIKRIENQSSGVIPIMKMLED
AFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELA
KNNEEMYLFSPYDVEQVYGVPFSEISVSEKYREMVDDKRIRKSRINAREFFQVLAEIQFE
SGYPYMMFEDTVNRENPIAGRINMSNLCSEILQVNRASTYHEDLNYHRIGKDISCNLGSL
NIAKTMDAPDFGKAVETAIRALTAVADMSDIRSVPSIAEGNRSSHAIGLGQMNLHGYLAR
ERIFYGSEEGVDFTNIYFYTLAYHALRASNQLAIERGACFGGFEDSRYASGEYFSKYTER
EWQPQTARVRELFAAANIAIPGREEWLALRQSVMMHGLYNQNLQAVPPTGSISYINNSTS
SIHPIVSRIEIRKEGKIGRVYYPAPYMTNDNLEYYQDAYDIGPEKIIDTYAAATQHVDQG
LSLTLFFRDTATTRDINRAQIYAWRKGIKTIYYIRLRQMALEGTEVQGCVSCAL
NT seq 2145 nt   +upstreamnt  +downstreamnt
ttggcaacgacagaactgaccaggcccgccgccggcgcgctggactaccattcgctcaac
gcgatgctcaatctttacgatgccgaaggccggatccagttcgacaaggatcggctggcg
gcgcggcattatttcctgcagcacgtcaatcagaacaccgtgttcttccacaacctggag
gaaaagctgcgctatctggtggaggaaggctattacgagccgcaggtgctggcgcagtat
gatttcccgtttatcaagcagctgttccagcaggcctacgccaaaaaattccgcttcgag
accttcctcggcgccttcaagtattacaccagctacacgctgaaaaccttcgacggcaag
cgttatctcgaacgctacgaagaccgggtgtgcatggtggcgctgacgctggcggcgggc
gatacccggcttgcgcaggatctggtggaagagatgatttccggccgcttccagccggcg
acgccgaccttcctcaactgcggcaagcagcagcgcggcgagctggtgtcctgtttcctg
ctgcgcatcgaagacaatatggagtcgatcggccgggcggtgaactccgcgctgcagctg
tcgaaacgcggcggcggcgtggccttcctgctgaccaacatccgcgaagtgggcgcgccg
atcaaacgcatcgagaatcagtcctccggggttattccgatcatgaaaatgcttgaggac
gccttctcctacgccaaccagctgggcgcgcgccagggcgccggcgcggtgtatctcaac
gcccaccacccggacattctgcgcttcctcgacaccaagcgcgaaaacgccgacgagaaa
atccgcatcaagacgctgtcgctgggggtggtgatcccggacatcacctttgagctggcg
aaaaataacgaggagatgtatctgttctcgccttacgacgtggaacaggtctacggcgtg
ccgttctcggagattagcgtcagcgaaaaataccgcgagatggtggacgacaagcgcatc
cgcaaatcgcgcatcaacgcccgcgagttcttccaggtgctggcggagatccagttcgag
tccggctacccgtacatgatgttcgaggatacggtcaaccgcgaaaacccgatcgccggg
cgcatcaacatgagcaatctgtgttcggagatcctgcaggtcaaccgcgccagcacctac
catgaagatctcaattaccatcgcatcggcaaggatatctcctgcaacctcggttcgctg
aacatcgccaaaaccatggatgcgccggacttcggcaaagcggtggagaccgcgatccgc
gcgctgaccgcggtggccgacatgagcgacattcgctcggtgccgtcgatcgccgaaggc
aaccgcagctcgcacgccatcggcctggggcagatgaacctgcacggctacctggcgcgc
gaacgcatcttctacggctcggaagaaggcgtcgattttaccaatatctatttctatacc
ctggcctaccacgcgctgcgcgcgtccaatcagctggcgatcgaacgcggggcctgcttt
ggcggcttcgaggattcccgctacgccagcggcgaatacttcagcaagtataccgagcgg
gagtggcagccgcagaccgcacgcgtgcgtgagctgttcgccgccgccaacatcgccatt
ccgggccgcgaagagtggctggcgctgcgccagtcggtgatgatgcacggcctgtataat
cagaacctgcaggcggtgccgccgaccggttcgatttcctacatcaacaactccacctcc
agcatccacccgatcgtttcgcgcatcgagatccgcaaggagggcaagattggccgggta
tactaccccgcgccctacatgaccaacgacaacctggagtattaccaggatgcctacgac
atcgggccggaaaagatcatcgacacctacgccgccgctacgcagcacgtcgatcagggg
ttgtcgctgacgctgttcttccgcgacaccgccaccacccgcgatatcaaccgcgcgcag
atctacgcctggcgcaagggcatcaagaccatctactacatccgcctgcgccagatggcg
ctggaaggcaccgaggtgcagggctgcgtgtcctgcgcgctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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