KEGG   Streptomyces formicae: KY5_4047c
Entry
KY5_4047c         CDS       T05416                                 
Name
(GenBank) tRNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
sfk  Streptomyces formicae
Pathway
sfk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KY5_4047c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfk03019]
    KY5_4047c
Enzymes [BR:sfk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     KY5_4047c
Messenger RNA biogenesis [BR:sfk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     KY5_4047c
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 Bap31_Bap29_C
Other DBs
NCBI-ProteinID: ATL29065
UniProt: A0A291QC85
Position
complement(4780512..4781954)
AA seq 480 aa
MPNANEDNPSALSQVQRRAVTELLRVSPVADDLARRFQEAGFALALVGGSVRDALLGRLG
NDLDFTTDARPEDVLKIVRPWADAVWEVGIAFGTVGCQKEGYQIEVTTYRSEAYDRTSRK
PEVSYGESIEEDLVRRDFTVNAMAVALPEKEFIDPHGGLDDLSERVLRTPGTPEESFSDD
PLRMMRAARFAAQLDFEVAPEVVAAMKAMAERIEIVSAERVRDELNKLILSAHPREGLAL
LVDTGLADRVLPELPALRLERDEHHRHKDVYDHSLIVLEQAMALETEGPDLTLRIAALLH
DIGKPKTRRFEDDGRVSFHHHEVVGAKMVKKRMTALKYSNELVKDVSRLVELHLRFHGYG
TGEWTDSAVRRYVRDAGPLLNRLHKLTRSDCTTRNKRKANALSRAYDGLEERIARLQEQE
ELDSIRPDLDGNDIMEILGVRPGPVIGKAYKFLLELRLENGPMERDAAVAALKEWWAEQD
NT seq 1443 nt   +upstreamnt  +downstreamnt
gtgccgaacgccaatgaagacaatcccagcgcactgagccaggtgcagcgccgcgcggtc
accgagctgctgcgtgtgtcccctgtcgcggacgatctcgcccgccgtttccaggaggcg
ggtttcgccctcgccctggtcggtggctcggtcagggatgccctgctgggccggctcggc
aatgatctggacttcaccaccgacgcccgccccgaggacgtactgaagatcgtgcgtccg
tgggccgacgcggtctgggaggtcgggatcgccttcggcacggtcggctgccagaaggag
ggttaccagatcgaggtcacgacgtaccgctccgaggcgtacgacaggacctcgcgcaag
cccgaggtgtcctacggcgaatccatcgaggaagacctcgtacgccgtgacttcaccgtg
aacgcgatggccgtggcgctccccgagaaggagttcatcgacccgcacggtggtctcgac
gacctttccgagcgggttctgcggaccccggggacgcccgaggagtccttctcggacgat
ccgctgcggatgatgcgggccgcgcgcttcgccgcgcagctggacttcgaggtggccccc
gaggtcgtcgcggccatgaaggcgatggccgagcgcatcgagatcgtctccgcggagcgg
gtgcgggacgagctgaacaagttgatcctctccgcacacccgcgcgagggccttgccctc
ctcgtcgacacgggcctggccgaccgggtcctgcccgagcttcccgcgctgcgcctggag
cgggacgagcaccaccgccacaaggacgtctacgaccactcgctgatcgtcctggagcag
gcgatggcgctggagaccgaaggtcccgacctgacgctgcgcatcgcggcgctgctgcac
gacatcggcaagccgaagacgcggcgcttcgaggacgacggccgggtctcgttccaccac
cacgaggtggtcggcgccaagatggtcaagaagcgcatgacggcgctcaagtactccaac
gagctcgtgaaggacgtctcgcgtctggtcgagctgcacctgcgcttccacggctacggc
acgggagagtggacggattcggcggtacgccgctatgtgcgggacgcgggcccgctcctc
aaccgactgcacaagctgacccgctccgactgcacgacgcgcaacaagcgcaaggcgaat
gccctgtcgcgcgcgtacgacggcctggaggagcgcatcgcccgcctccaggagcaggag
gagctggactcgatccggcccgacctcgacggcaacgacatcatggagatcctgggcgtg
cgccccgggcccgtgatcggcaaggcctacaagttcctgctggaactgcgcctcgagaac
ggtccgatggaacgggacgccgcggtggcggcgctcaaggagtggtgggccgagcaggac
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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