KEGG   Streptomyces formicae: KY5_7403
Entry
KY5_7403          CDS       T05416                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sfk  Streptomyces formicae
Pathway
sfk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sfk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KY5_7403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfk03400]
    KY5_7403
Enzymes [BR:sfk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     KY5_7403
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     KY5_7403
DNA repair and recombination proteins [BR:sfk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     KY5_7403
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zf-TFIIB Ribosomal_S13 zf-RRN7 Zn-ribbon_8
Other DBs
NCBI-ProteinID: ATL32421
UniProt: A0A291QL44
Position
8689606..8690466
AA seq 286 aa
MPELPEVEALRAFLTDHLVGRQVVRVLPVAVSVLKTYDPPLTALEGRTVTGVARHGKFLD
VDAEGTHLVTHLARAGWLQWKDRLPDGAPRPGKGPLALRVALETGEGFDLTEAGTQKRLA
VYVTEDPRTVPGIARLGPDPLAADFDEERLAGLLAGERRQIKGALRDQSLIAGIGNAYSD
EILHAARMSPFKIASNLTKEEVHGLHVALLATLTEAVDRSRGVAAGRLKAEKKSGLRVHG
RTGEPCPVCGDTIREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atgccggaactgcccgaagtggaggcgctgcgcgccttcctgacggaccatctggtcggt
cgccaggtcgtgcgcgtgctgcccgtcgcggtcagcgtcctcaagacgtacgacccgccg
ctcaccgccctggagggccgcacggtcaccggggtggcgcggcacggcaagttcctggac
gtcgacgccgaggggacgcacctcgtcacgcacctggcccgcgcgggctggctccaatgg
aaggaccgtctgccggacggcgccccgcgccccggcaagggcccgctggcgctgcgggtg
gccctggagaccggcgagggcttcgacctcacggaggcgggcacccagaagcgcctggcc
gtgtacgtcaccgaggacccccgcacggtcccggggatcgcccgcctcggccccgacccg
ctcgccgccgacttcgacgaggagcgcctggccgggctgctcgcgggtgaacggcggcag
atcaagggggcgttgcgcgaccagagcctgatcgcgggcatcggcaacgcctacagcgac
gagatcctgcacgcggcgcgcatgtcgccgttcaagatcgcgtcgaacctcacgaaggag
gaagtccatgggctgcatgtggcgctgctggctacgctgaccgaggcggtggaccgttcg
cgcggtgtcgcggcgggccgcctcaaggcggagaagaagagcggcctgcgcgtgcacggc
cgcaccggcgagccgtgccccgtgtgcggcgacacgatccgggaggtgtccttcgccgac
tcctcgttgcagtactgcccgacgtgccagacgggcggcaagccgctcgcggaccgcagg
atgtcacgactgctgaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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