KEGG   Shigella flexneri 301 (serotype 2a): SF0113
Entry
SF0113            CDS       T00097                                 
Symbol
lpdA
Name
(RefSeq) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sfl  Shigella flexneri 301 (serotype 2a)
Pathway
sfl00010  Glycolysis / Gluconeogenesis
sfl00020  Citrate cycle (TCA cycle)
sfl00260  Glycine, serine and threonine metabolism
sfl00280  Valine, leucine and isoleucine degradation
sfl00310  Lysine degradation
sfl00380  Tryptophan metabolism
sfl00620  Pyruvate metabolism
sfl00630  Glyoxylate and dicarboxylate metabolism
sfl00640  Propanoate metabolism
sfl00785  Lipoic acid metabolism
sfl01100  Metabolic pathways
sfl01110  Biosynthesis of secondary metabolites
sfl01120  Microbial metabolism in diverse environments
sfl01200  Carbon metabolism
sfl01210  2-Oxocarboxylic acid metabolism
sfl01240  Biosynthesis of cofactors
Module
sfl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sfl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sfl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sfl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SF0113 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SF0113 (lpdA)
   00620 Pyruvate metabolism
    SF0113 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SF0113 (lpdA)
   00640 Propanoate metabolism
    SF0113 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SF0113 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SF0113 (lpdA)
   00310 Lysine degradation
    SF0113 (lpdA)
   00380 Tryptophan metabolism
    SF0113 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SF0113 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfl04147]
    SF0113 (lpdA)
Enzymes [BR:sfl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SF0113 (lpdA)
Exosome [BR:sfl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SF0113 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C Thi4 NAD_binding_8 FAD_binding_3 DAO Lycopene_cycl FMO-like
Other DBs
NCBI-GeneID: 1024526
NCBI-ProteinID: NP_706070
UniProt: P0A9P3
Position
126164..127588
AA seq 474 aa
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtactgaaatcaaaactcaggtcgtggtacttggggcaggccccgcaggttactcc
gctgccttccgttgcgctgatttaggtctggaaaccgtaatcgtagaacgttacaacacc
cttggcggtgtttgcctgaacgtcggctgtatcccttctaaagcactgctgcacgtagca
aaagttatcgaagaagccaaagcgctggctgaacacggtatcgtcttcggcgaaccgaaa
accgatattgacaagattcgtacctggaaagagaaagtgatcaatcagctgaccggtggt
ctggctggtatggcgaaaggccgcaaagtcaaagtggtcaacggtctgggtaaattcacc
ggggctaacaccctggaagttgaaggtgagaacggcaaaaccgtgatcaacttcgacaat
gcgatcattgcagcgggttctcgcccgatccaactgccgtttattccgcatgaagatccg
cgtatctgggactccactgacgcgctggaactgaaagaagtaccagaacgcctgctggta
atgggtggcggtatcatcggtctggaaatgggcaccgtttaccacgcgctgggttcacag
attgacgtggttgaaatgttcgaccaggttatcccggcagctgacaaagacatcgttaaa
gtcttcaccaagcgtatcagcaagaaattcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagacggtatttatgtgacgatggaaggcaaaaaagcaccagctgaa
ccgcagcgttacgacgccgtgctggtagcgattggtcgtgtgccgaacggtaaaaacctc
gacgcaggcaaagctggcgtggaagttgacgaccgtggtttcatccgcgttgacaaacag
ctgcgtaccaacgtaccgcacatctttgctatcggcgatatcgtcggtcagccgatgctg
gcacacaaaggtgttcacgaaggtcacgttgccgctgaagttatcgccggtaagaaacac
tacttcgatccgaaagttatcccgtccatcgcctataccgaaccagaagttgcatgggta
ggtctgactgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccaccttcccg
tgggctgcttctggtcgtgctatcgcttctgactgcgcagacggtatgaccaagctgatt
ttcgacaaagaatctcaccgtgtgatcggtggtgcgattgttggtaccaacggcggcgag
ctgctgggtgaaatcggcctggcaatcgaaatgggttgtgatgctgaagacatcgcactg
accatccacgcgcacccgactctgcacgagtctgtgggcctggcggcagaagtgttcgaa
ggtagcattaccgacctgccgaacccgaaagcgaagaagaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (97)   

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