KEGG   Shigella flexneri 301 (serotype 2a): SF2555
Entry
SF2555            CDS       T00097                                 
Symbol
xseA
Name
(RefSeq) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
sfl  Shigella flexneri 301 (serotype 2a)
Pathway
sfl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SF2555 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfl03400]
    SF2555 (xseA)
Enzymes [BR:sfl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     SF2555 (xseA)
DNA repair and recombination proteins [BR:sfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     SF2555 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon OMPdecase
Other DBs
NCBI-GeneID: 1025633
NCBI-ProteinID: NP_708348
UniProt: Q83QL0
Position
2623684..2625054
AA seq 456 aa
MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK
LQAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDD
APGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET
DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRRFTQIH
HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQPKIHRT
QTRIQQLEYRLAEILRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKV
KQVKTGEMLTTRLEDGWIESEVKNIQPVKKSRKKVH
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgttaccttctcaatcccctgcaatttttaccgttagtcgcctgaatcaaacggttcgt
ctgctgcttgagcatgagatgggacaggtttggatcagcggcgaaatctctaatttcaca
caaccggcttccggtcactggtactttacactcaaagacgacaccgcccaggtacgctgc
gcgatgttccgcaacagcaaccgccgggtcaccttccgtccgcagcatgggcaacaagtt
ttagttcgcgccaatattacgctctacgagccgcgcggcgactaccagataatcgttgag
agtatgcagccggccggtgaagggctgctgcaacagaagtacgaacagctcaaagcgaag
ttgcaggctgaatgtttgttcgatcagcaatacaaaaaaccacttccctcccctgcgcat
tgcgttggtgtgatcacctcaaaaaccggtgctgcgctacatgatattttgcatgtgtta
aaacgtcgcgatccttctctaccggtgatcatctaccccacctccgttcagggcgatgac
gcgccggggcaaattgttcgcgccattgaactggcgaatcagcgcaatgagtgcgacgtg
ttgatcgttgggcgcggcggcggttcgctggaagatttatggagttttaacgacgaacgc
gtagcgcgggcgatttttgccagccgcattccggtcgtcagcgccgtcgggcatgagacg
gatgtgaccattgccgattttgttgccgatctgcgtgcgccaacgccgtctgccgccgct
gaagtagtgagccgtaatcagcaagagttactgcgccaggtgcaatcggcccgtcaacgg
ctggagatggcgatggattattatctcgccaaccgtacacgtcgctttacgcagattcat
catcgcttgcagcagcagcatccgcagctccggctggcacgccagcaaaccatgcttgaa
cgcctgcaaaaacggatgagctttgcgctggaaaatcagcttaagcgtgccgggcaacag
cagcagcgattaacacagcggctgaatcagcaaaatccacagccgaagattcatcgcacg
caaacgcgcattcagcaactggaatatcgtttagcagaaatcctgcgcgcacagcttagc
gccacgcgtgaacgtttcggtaatgcagtaacgcacctcgaagccgtaagcccactgtca
acgctggcgcgtggatacagcgttactactgctactgacggcaatgtactgaaaaaagtg
aagcaagttaaaacgggtgaaatgctaaccacacgtctggaagacggctggatagaaagt
gaagtaaaaaacatccagccggtaaaaaaatcgcgtaaaaaggttcattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system