KEGG   Shigella flexneri 301 (serotype 2a): SF4319
Entry
SF4319            CDS       T00097                                 
Symbol
yjeR
Name
(RefSeq) hypothetical protein
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
sfl  Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:sfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfl03019]
    SF4319 (yjeR)
   03009 Ribosome biogenesis [BR:sfl03009]
    SF4319 (yjeR)
Messenger RNA biogenesis [BR:sfl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SF4319 (yjeR)
Ribosome biogenesis [BR:sfl03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    SF4319 (yjeR)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-GeneID: 1024781
NCBI-ProteinID: NP_710030
UniProt: Q83IJ9
Position
4496121..4496735
AA seq 204 aa
MGKTSMIHAIVDQYSHCEWVENSMSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANL
NILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWV
PAGKSPICGNSIGQDRRFLFKYMPELEVYFHYRYLDVSTLKELARRWKPEILDGFTKQGT
HQAMDDIRESVAELAYYREHFIKL
NT seq 615 nt   +upstreamnt  +downstreamnt
atgggcaaaacatctatgatacacgcaattgtggatcaatatagtcactgtgaatgggtg
gaaaatagcatgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggt
ctggatcccgagcgcgatcgcattattgagattgccacgctggtgaccgatgccaatctg
aatattctggcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctg
atggatgactggaacgtgcgcacccataccgccagcgggctggtagagcgcgtgaaagcg
agcacgatgggcgatcgggaagctgaactggcaacgctcgaattcttaaaacagtgggtg
cctgcgggaaaatcgccgatttgcggtaacagcatcggacaggaccgtcgtttcctgttt
aaatacatgccggagctggaagtctacttccactaccgttatctcgatgtcagcaccctg
aaagagctggcgcgccgctggaagccggaaattctggatggttttaccaagcaggggacg
catcaggcgatggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcat
tttatcaagctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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