KEGG   Scleropages formosus (Asian bonytongue): 108929067
Entry
108929067         CDS       T04919                                 
Symbol
ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
  KO
K17985  activating molecule in BECN1-regulated autophagy protein 1
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04137  Mitophagy - animal
sfm04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108929067 (ambra1)
   04137 Mitophagy - animal
    108929067 (ambra1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfm04131]
    108929067 (ambra1)
   03029 Mitochondrial biogenesis [BR:sfm03029]
    108929067 (ambra1)
Membrane trafficking [BR:sfm04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    108929067 (ambra1)
Mitochondrial biogenesis [BR:sfm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    108929067 (ambra1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 108929067
NCBI-ProteinID: XP_029109343
Position
7:complement(29849270..29906462)
AA seq 1429 aa
MKGSHQKNSVRILSGRERGAQTCGSQRLLQQLVEEKTRWMKWQSQKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCIHSLVGHRRTPWCVTFHPTILGLVASGCLDGEV
RIWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNEVHFWDWSRREPFAVVKTASET
ERVRLVRFDPLGHNLLTAIVNPSNQQNDDDSEVPMDSVEMPHFRPRPFLQSQPVRRTPIL
HNFLHILSSRSSAVQAGEQPAAPPPPAEPSVLPLGRYTSLRERPSYHACVQHLGMVCFCS
RCAASRAPPAPEDSAGPPPPELPSHASTFSSARTEPRQPSEARSSSRASAFSSVYSSTAG
NTLRNLSTGPVRRGLLAVTSPPIGHSSQADRDSDHLAPADWTGGVLNVRTEAGPASGAGV
VGDGMPPPRTSASSVSLLSVLRQQEGTSQPPFYTSGTEGRGYSLPGSGPGPSSSNPRSGA
STSCGHHPVAEGGRKSPASIRNVLQCNLSRYFMEYDRMQSVEQNMGAVGNEGSSQQQQQT
QELLNNNNIDSERPGPSHYQLPHPGESNSGLPRGHLNRCRACHNLLTFNHDTQRWERTVQ
TATASSSEEGTAWQPPGSAFEAFGQGSPRERQPTERRAVATAAEAAGSMPSTSGSHFPHA
GTSRQQGEQTVGLVYSQETGQWERVYRQSATSRTGNVSQDALNQEMPEESSDEDSLRRRL
LESSLISLSRYDISGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRL
RPLPSSSSSSSDGPASNPSPPIENSEVDFEEFEDNGDRARHRTPRNARMSAPSLGRFVPR
RFLLPEYLPYAGIFHERGQPGLATHSSVNRVLAGSETRIGLLLGAVIGDGQSAVASNIAN
TTYRLQWWDFTHFDLPEISNATVNVLVPSCKIYNDASCDISADGQLLAVFIPSSQRGFPD
EGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPTPDHMVAQ
VFRLQQPHGGETSMRRVFNVVYPMAPDQRRHVSINSARWLPEPGMGLAYGTNKGDLVICR
PVCDGDGSSELATEPIFSINNGAGAVSGRGSERPGTSRANWRSDRDMGLMNAIGLQPRHP
TPSVTSQGTQTPIVQLQNAETQTDRDLQESNSLQSAEGMVQVEGPLPSTSSGRSSETLPH
ALQPTSGPADGTTETGSATGSVGDASEYGSSEDALSRIRRLIAEGGMTAVVQREQSTTMA
SMGGFGNNIIVSHRIHRSSQTGAESTAAGVAQGGGAPVASDSASSPPGLPGLSCCPSTSA
QGPMALGLGHAPSPAHMLQLTHRSSSPTEPPVVQGQPTVAAPSPFVNIFAPEATDRGVEQ
PAGTDDVFEGNQMDTLVPRPFLSSSSPSRSFPNNNRSSSSAYPDFPHSR
NT seq 4290 nt   +upstreamnt  +downstreamnt
atgaagggctcccaccagaagaactcggtgcggatcctatccggccgggagcgcggcgct
cagacatgcggctcccagcggctcctgcagcagctggtggaggagaagacccgctggatg
aagtggcagagccagaaagtggagttgccagacagccctcgttcaacattcttattggcc
ttcagcccggatagaacactaatggcttctacccatgtgaaccacaacatctacataact
gaggtgaagacgggcaagtgcatccattctctggtgggccatcgtcgcacaccatggtgt
gtgacctttcaccccaccatcctgggcctggtggcctctggctgccttgatggagaagtc
cgtatttgggacctgcatggtggcagtgagagctggttcacagagagcaatgtggccatt
gcctctctggccttccaccccactgcccagctgctcctcatcgcaaccaacaacgaggtt
cacttctgggactggagtcgacgggagccctttgcggtggttaagactgctagtgagacc
gagcgagtcaggttggttagatttgacccattaggacacaaccttctgacagctattgta
aacccttcaaaccaacagaacgacgatgactccgaggtccctatggacagtgtggagatg
cctcattttcggccccggccatttttgcagtcgcagcctgtgcggcgcactcccatcctc
cacaacttcctgcacatcctctcctctcgcagctctgcagtgcaggccggggagcagcct
gcagccccaccaccccctgccgagccctctgtcctgcccttgggtcgttacacctccttg
cgggagcggccctcataccatgcttgtgtgcagcatctgggcatggtatgcttttgcagc
cgctgcgcagcatcacgtgcgccgcctgctcctgaagactcggccggcccgcccccacca
gaactcccttcccatgcctctaccttctcttctgcccgtacggagccacggcagccctct
gaggcacgctctagcagccgggcatctgccttcagcagcgtatacagtagcacggcaggc
aacaccctgcgcaacctgtcaacagggcctgtacgtcggggccttctggccgtcactagt
cccccaattggccactcctcacaggctgaccgggactccgatcacttggcgccggccgac
tggacaggcggtgtgctgaatgttcgtacagaggcagggcccgctagtggcgccggggtt
gtgggtgacggcatgcctcctcctaggactagtgcctcctccgtcagcctgctttctgtg
cttcggcagcaggagggcacctcccagcctccattctacacttccggtacagaggggcgg
ggctattccttgccagggtcagggcctggaccctccagcagcaaccccaggagcggggcg
agcactagctgtgggcaccaccccgtggctgagggcggtagaaaaagccctgcttccatc
cgaaacgtcctgcagtgcaacctgagccgctactttatggagtacgaccgcatgcagtcc
gtggagcagaacatgggtgccgtgggcaacgaaggcagctcccagcagcagcagcagacg
caggaactgctcaacaacaataacattgactctgagcgaccgggcccatcacactatcaa
ctgccgcaccctggcgagagcaactctggcctcccgcgcggtcacctaaaccgctgtcgt
gcatgtcacaacctgctcacattcaaccacgacactcagcgctgggagcgcactgtgcag
actgccactgcctccagctcagaggagggcactgcctggcagccgccaggctctgccttc
gaagcctttggccaggggtcgccacgtgagcgccagcccaccgaaaggagagcggtggct
acagcggcggaagcggccggcagcatgccatccacctctgggtcacatttcccccatgca
gggacttcgaggcagcaaggggagcagactgtggggctggtgtacagccaggagacgggc
cagtgggagcgcgtttacaggcagtccgccacaagccgaactgggaatgtatcacaagac
gccttaaaccaagaaatgcctgaggagagctcggacgaggattcgctgcgaaggagactg
ctagagtcctctctcatctctctctctcgatacgacatatctggatcccgagaccatccc
atctacccggatcctgcgaggttgtccccggctgcctattacgcccagcgcatgatccaa
tacctgtctcggcgtgacagcatccgccagcgctccctccgctaccagcagaaccgcctg
cggcccttgccctcgtcctcgtcctcatcctctgatggcccagccagcaatccatcgccc
cccatagagaacagtgaggtggactttgaggagtttgaggacaacggtgaccgggcaagg
cacagaacaccacgcaatgctcgaatgtcggctccctcccttgggcgcttcgttccccgg
cggttcttgttgcccgagtacctgccatatgcaggcattttccacgagaggggtcagcca
ggcttggccactcactcatctgttaacagagtcctggcagggtcagagacacggattgga
ctgcttttaggtgcagtgataggagatggtcagtccgctgtggccagcaacattgccaat
accacttaccggctccagtggtgggacttcacccattttgatcttccggagatcagtaac
gccactgtcaatgtcctggtgccgagctgtaagatctacaacgatgccagctgtgacatc
tctgccgatgggcagctcctggccgtatttattcccagcagccagcggggctttccagat
gagggcatcctggccgtctattctctagccccacacaatcttggggagatgctctacacc
aagagatttggtcccaatgcaatttcggtcagcctgtcccccatgggccgctacgtgatg
gtgggcctagcctcccgcaggatcctgctgcaccccaccccagatcatatggtggcacag
gtgttccgcctccagcagcctcacggaggagagacgtccatgaggagagtgttcaatgtg
gtttacccgatggccccggaccaacggagacacgtcagtattaattctgccagatggctt
cctgagccgggcatggggctggcctatgggaccaacaaaggggacctggtcatctgcagg
cctgtgtgtgacggtgatggttcctccgagctcgctaccgaacccatattctcaatcaac
aatggtgctggtgctgtcagcgggcggggctctgagcgtcctgggacaagcagagcaaac
tggaggtctgacagggacatgggtttgatgaatgcgattggcctgcagccccgccaccct
accccttccgtaacctcacagggcacacagacgcccatcgtgcaactgcagaacgccgag
acccagacagaccgggacctgcaggagtccaacagccttcaatctgcagaaggtatggtg
caagtggaaggcccgctccccagcaccagcagcggaaggagctcggagacgcttcctcat
gctctgcaacccaccagcggccctgcggatgggactaccgagacagggtcagccaccggc
agcgtgggtgacgcctcggagtacggatccagcgaagacgccctgtcacggatccgtcgg
ctcattgctgagggggggatgacagccgtggttcaacgggagcagagcaccaccatggca
tccatgggcggcttcggcaacaacatcattgtcagtcaccgcatccaccgtagctcacag
acaggggcagagtccacagcagctggtgtggcacagggtgggggggctcctgtggcaagt
gatagcgcttcctccccccccggcctccctggtctctcctgctgcccatccactagtgcc
cagggtcccatggctttggggttggggcatgcccccagcccagcccacatgctacagttg
actcacaggtcctccagccccactgagcctcccgtggtgcagggtcaacctacagtggca
gcaccttcgccgtttgtcaacatctttgcccccgaggcgacagatcgcggtgttgagcag
cctgcaggtactgatgatgtgttcgagggcaaccagatggatacccttgtgccccgcccc
tttctttccagctcctccccctcccgctccttccctaacaacaatcgcagcagcagcagc
gcctaccctgactttccacacagcaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (64)   

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