KEGG   Scleropages formosus (Asian bonytongue): 108931651
Entry
108931651         CDS       T04919                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108931651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfm03021]
    108931651
   03036 Chromosome and associated proteins [BR:sfm03036]
    108931651
Transcription machinery [BR:sfm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108931651
   Coactivators
    SAGA/TFTC/STAGA complex
     108931651
Chromosome and associated proteins [BR:sfm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     108931651
SSDB
Motif
Pfam: TAF4 TAFH TAF
Other DBs
NCBI-GeneID: 108931651
NCBI-ProteinID: XP_029102005
Position
19:10745090..10781019
AA seq 1165 aa
MPVDAGETQTPSVGGAADAGGGDVALEVAAGGAVAARGALLPDRRGVSGDLNIQGAPCSE
TPLSNRHDAAAAAGTTFSSLGTAGTAGTTVGPLGTASRPVSTVGTAGTTVSIVSKAGTPS
STVGISGTTIGSLGTAGTPVSIVGTAGAIIGSLSTAGTPMTIVSKAGTPSSTVGTAGTAG
GSLGTAGTPVSTVGTAGATSSSLGTAGTSVTAVGTVGATVGPLGTAGRPVSTVGTAGTPV
SIVGTAGTIIGSFGTAGTPVAIVSKAGTPSSSVGISGTTVGSLGTAGTPVSTVGTAGTTL
SIVGTAGAIIGSLGTAGTPMTIVSKTGTPSSTVGTAGTAVGTAGTPVSTVGTAGATSSSL
STAGTPVAAVGTVGRAGTTVGPLGTAGRPVSTVGTAGTPMSIMGTAGAIIGSLGTAGTPV
AVVSTAGTPSSTVGTAGATIGALGTAGTSSSAVVTAGTPVYINLHTSGVSSTPSSTVPKI
VISAGRLGSELPAAIGTRSSPAALPPKAAGQGGVGVSLATASQVGVARLATISQVPGKET
VITLPRAATPQASGGQRGAQGASVQLPANFQIPQGMMLIRSESGQLMLVSQQALAQAQAQ
GIIPRAAGTANGSVARAAAPQGSAAAAFKKADAAAAVRAPPVPSSTPGTSYQKMSVLKVR
GYTAGQTVRPAVPPQSAAPLVIPTKTEGPKTAPVATISAETLENVKKCKNFLVTLIKLAS
SGTHSAEMAKNVKELVKSLLDGKIEPEEFTDRLYMELKSSPQPYLVPFLKRSLPAVRQLT
PNSQLFIQQCAPLSSTKPTPVPAAVPPMTGAAVSKTLQANAGVNQPLKATQATRPTQLVI
QQPRGVVIKQSAVPASAQSKAAPKQLVTALQTTSHPTGAAVKQSPLQVSRIISLQPPQVQ
KIPFKDTASASFRDEDDINDVASMAGVNLNEENARILATNSEHVGTIVRSCRDDPFLSVA
ALQKRIVEIGKRHGVADIGTDVVSLVSYATQERLRELVEKLTAVAQHRNASYKDDLTYRQ
TTDTRSQLRFLEQLDRLERRRKEEEEREVLLRIAKSRSNREDPELLRLKQKAKEMQQLEL
AQTQQRDANLTALAAIGPRKKRPLESLGYGSGNEAPGALASSASSVVKQSSVHRVTRVSL
RDLVFCMEQDPALRHSLCLYRALIR
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgccggtggacgctggagagacacagactccgtccgtagggggcgctgccgatgctgga
ggcggggatgttgcgctggaagtggccgcgggaggagccgttgctgcccggggggctctg
ctgcctgaccggcggggtgtgtccggcgatttgaacatccagggggccccctgttcagaa
acccccctctccaaccgccatgatgcggctgccgcagctgggactacgttcagctcgctt
ggcacagctggcacagctgggactacagtcggcccacttggcacagctagcagacccgtg
tctacagtgggaacagctggcacaaccgtgtctatagtcagcaaagctggcacaccctca
tctactgtcggcatatctgggactacaatcggctcgcttggcacagctggcacacctgtg
tctatagtgggcacagctggggccataattggctcacttagcacagctggcacacctatg
actatagtaagcaaagctggcacaccctcatctactgttggcacagctgggactgcaggt
ggctcacttggcacagctggcacacctgtgtctacagtgggcacagctggggctacaagc
agctcacttggcacagctggcacttccgtgactgcagtgggcacagttggggctacagtt
ggcccacttggcacagctggcagacctgtgtctacagtgggcacagctggcacgcccgtg
tctatagtgggcacagctgggaccataattggctcatttggcacagctggcacgcctgtg
gctatagtcagcaaagctggcacaccctcatcttctgtcggcatatctgggactacagtc
ggctcacttggcacagctggcacacccgtctctacagtaggaacagctggcacaactctg
tctatagtgggcacagctggggccataattggctcacttggcacagctggcacacctatg
actatagtaagcaaaactggcacaccctcatctactgttggcacagctgggactgcagtt
ggcacagctggcacacctgtgtctacagtgggcacagctggggctacaagcagctcgctt
agcacagctggcactcctgtggctgcagttggcacagtgggcagagctgggactacagtc
ggcccacttggcacagctggcagacctgtgtctacagtgggcacagctggcacacccatg
tctataatgggcacagctggggccataatcggctcacttggcacagctggcacaccggtg
gctgtagtcagtacagctggcacaccctcatctactgtcggcacagctggggctacaatc
ggcgcactcggcacagctggcacatcctcgtctgcggttgtcaccgccggcacacctgtc
tacataaatctgcacacctccggtgtgtccagcaccccttcctccacggtgcctaagatt
gtgattagcgccgggcgacttggctccgagctcccagccgcgatcgggaccagatcgagt
cccgcggcgcttcctccgaaagctgcaggccagggcggcgtcggcgtcagcttggcgacc
gcctcgcaggtcggggttgctcggctcgccacgatttcccaggtgccgggcaaggagacc
gtaatcaccctgcccagggctgcaactccgcaggccagtggggggcagcgcggcgctcag
ggcgcctccgtgcagctgcctgccaacttccagatccctcaaggcatgatgctcatcagg
agcgagagcgggcagcttatgctggtgtcccagcaggctctggcccaggcccaggcccag
gggatcatccctagggccgccgggactgccaacggctccgtcgccagggccgcggcgccg
cagggttctgcagcagcagcttttaagaaagcggatgctgcagctgctgtaagagcacca
cctgtgccgagcagcacacctggcacttcctaccaaaagatgtctgtcctaaaggtaaga
ggctacactgctggtcaaactgtgcgtccagctgtccccccacaaagtgctgcgcctttg
gtcattcccactaaaactgagggacccaaaaccgcacctgtagccaccatctctgcggaa
accctggagaatgtgaagaaatgtaagaatttcctagtgacgttaattaagctggcctcc
agcggaacacattctgctgaaatggcaaaaaatgtgaaggagttggtgaaaagtctgctg
gatggaaaaattgagccagaggagtttacagacagactttacatggagctgaagtcgtct
ccacagccttatcttgttccctttctcaagaggagtctaccagctgtgcgccagctcacc
ccaaactcgcagctcttcatccagcagtgtgcaccgctgtcgtccacaaagcccactccc
gtccctgcagctgtaccgcctatgactggggcagcagtgagcaagaccttgcaggcaaat
gcaggggttaaccagccgcttaaagccacgcaggctaccaggcccacccagctggtgatc
cagcagcctagaggagttgtgataaagcagtctgccgtgccggcgtctgcgcagagcaaa
gccgcaccaaagcagctggtgacagcgctgcagacgacttcacatcccacaggagcggct
gtgaagcagtcacctcttcaggtgtccagaattatcagcctgcagccccctcaggtgcag
aaaatccccttcaaggacactgcatctgcatccttcagagacgaggatgacatcaacgat
gtggcctccatggcaggtgtgaacctcaacgaggagaacgctcgcatcctagcaaccaac
tcggagcatgtgggtaccatagtgcggtcctgcagagatgacccattcctctcagtggct
gctttacagaagcggatcgtggagatcggtaagcggcacggcgtcgcggatatcggcacg
gatgttgtgagccttgtgtcttacgccacacaggagcggttaagggagctggtggagaag
ctgacagcagtggcccagcatcgaaacgcatcgtacaaggatgacctgacctatcggcag
acgactgacactcgctcccagctacggttcctggagcagctggaccggctggaaaggcgc
aggaaagaggaggaggagagggaagtgctcctacgcatcgccaagagccgttcaaaccga
gaagaccctgagctgctacgactgaagcagaaggccaaggagatgcagcagttggaactg
gcacagacgcaacaaagagatgcaaatctgactgcgctcgcagctattgggcctaggaag
aaacgaccactcgagtccctgggctacggatcgggaaacgaggcacctggcgctcttgct
tcctcggcctcctctgtcgtcaagcagtcgtcggtccacagggtcaccagggtcagcctg
cgggacctggtcttctgcatggaacaggacccggcactgaggcactcgctctgcttgtac
cgggctctgatcagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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