KEGG   Scleropages formosus (Asian bonytongue): 108934326
Entry
108934326         CDS       T04919                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03013  Nucleocytoplasmic transport
sfm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108934326
  09122 Translation
   03013 Nucleocytoplasmic transport
    108934326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfm03019]
    108934326
   03041 Spliceosome [BR:sfm03041]
    108934326
Messenger RNA biogenesis [BR:sfm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108934326
Spliceosome [BR:sfm03041]
 Complex C
  Other components
   EJC/TREX
    108934326
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108934326
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 108934326
NCBI-ProteinID: XP_018607470
Position
4:29335146..29370895
AA seq 1558 aa
MAPSVLPADWIKNWEKSGKTEFLQLCHNLADKTIDDVTVQDIQGILYELSWHVIRGNLKV
DLAASVLGDVMELREDMSSILADVFCVLDIETSCFEEKSKRDHFTQLVGACLFFMPDAVL
KERLDPETLESLGLVKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLENIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFLPLIKSYMCEPQTLC
HILGFKFKFHQEPNEETPSSLYHVAAALLQHNLIKLEDIYVHLLPLDATIMEEHKHEIME
AKQIARKLTMVVVPSEKSEDKEKDKEEEKTEKRPDNQKLGLLEALLRIGDWQHAQSIMEQ
MPPFYATSHKPIALALCQLVHLTVEPLYRRSGIPKGAKGRVLTPLQNKRAPKPAETFEDL
RREVFSMLCYLGPHLSHDPILFAKIVRLGKGFMKEYQNDSKLDKDKMDTLLSCFLSIADQ
VLLPSLTLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLLVKVKAQTVDRA
KYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTSLNY
DVLAYCIIEALANPEKEKMKHDDTTISAWLQSLASLCGAVFRKYPIELAGLLQYVTNQLK
AGKSFDLLILKEVVQKMAGIEITDEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRL
KDALLDHDLALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLS
TEDYIKRVPPIDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKVHKY
ITACEMVMAPVHEAVVSLHPPKVWDDIRPQFYATFWSLTMYDLAVPSSAYDREANKLKAQ
MKAIDENQEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLAKST
KNETITKFLQLCVFPRCIFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIYTVA
SCTENEARRYGRFLCCMLETVTRWHSDRAIYEKECGNYPGFLTIFRATGFDGGNKADQLD
YENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPCYPKVLNLGQALECRVL
KICQEEKEKRPDLYALAMGYSGQLKSRKVHMVPENEFHHKEQPVRSATPANIQNGPGSAS
KPAPTKPEDGMTDDADKSKDKSQGASKPANKANSTATKVATSNGNSAPNSTKAVKEKDDK
EKSVKEKKEKKERTPGSTPETKAVGKDKLKEERLGKDEKARDGKERTPKTSEDKMGKEEK
ARASCNLEFRSDKESSRERDVSKESKMKDSSKGEKGSTAASLKSPVPRSESAESEREQKR
RKLDTHSSPSHSSTVKDNLNELKDSSSKHYVNHNTATQSKSKEREMDKKDSEKSRDRSKE
REKKEDKDRKDRKRDHSNSDREMSQELKRRKDENGTNSSKHSKSASPVDSPRPTDKDKSK
SSKSSSKEKTDPAKPERNSTGGKKESRHDKEKSVKKEKRDSSGGKEDKKHHKSSEKHR
NT seq 4677 nt   +upstreamnt  +downstreamnt
atggcgccgtcggtcctccctgctgattggatcaaaaactgggaaaaatcaggcaaaact
gagtttttacaattatgccacaatcttgcagacaaaaccattgatgatgtgacagtacaa
gatattcagggcattctgtacgagctgtcttggcatgtcatccgaggaaacctcaaggtt
gacctggccgccagcgtactgggggatgtcatggaattacgggaggacatgtcatccatt
ttagctgatgttttttgtgtattagatatagaaactagttgctttgaggaaaaaagcaag
cgtgaccattttactcagttagtgggagcttgtctgttcttcatgccagatgctgtgctg
aaggaacgtctagacccagaaacactggaatcccttgggctcgtcaagcaagcacaacag
ttcaaccagaaaattgtcaaaatcaagaccaagctattttataagcagcagaaattcaac
ttgttaagagaggagaatgaaggttatgccaagctgatcacagagctggggcaggacctg
tctggcaacattaccagtcatcttgtccttgaaaatataaagtcattgatagggtgcttt
aatcttgacccaaaccgtgtgctggacattatcttggaggtgtatgaatgtcgctcggac
caagatgaattctttctgccccttatcaagtcctacatgtgtgagccccagaccctctgc
catatcctgggcttcaaattcaaattccatcaggaacccaacgaggagactccttcatcc
ttgtaccatgttgctgctgcactgcttcagcacaacctcatcaagcttgaggacatctat
gtgcatctgctacctctggatgctacaatcatggaggagcacaagcacgagatcatggag
gctaagcagatcgcccgcaaactcaccatggtcgtagtgccttcagagaagagtgaggat
aaggagaaagacaaagaggaggaaaagacagagaagagacctgataaccagaagctgggg
ctcttggaagccctgctgaggattggggactggcaacatgctcagagcatcatggagcag
atgccacccttctatgccacctcacacaagcctattgccttggcactgtgccagctggtg
cacttgaccgtggagccgctttaccgcagatctggcatccctaaaggtgccaaaggtcga
gttttgacacctttgcagaacaaacgagcccccaagccagctgagacttttgaagatctg
cgtagggaggtcttcagcatgctttgttacctaggcccgcacctgtcccacgaccctatc
ctctttgcgaagatcgtgcggctcggcaagggtttcatgaaagagtatcaaaatgacagc
aaacttgacaaggataagatggataccttgctgagctgcttccttagcattgctgatcag
gtgctgctgccctcgttgaccctgatggagtgcaatgcctgcatgtctgaggagctctgg
ggcctcttcaaactctttccctaccagcacaggtaccggctgtatggacagtggaagaat
gaaacctacaccagccaccctctgcttgttaaagtcaaagcacagacagttgaccgagcc
aaatacatcatgaagcgattgaccaaggagaatgtgaaaccctcgggaaggcagatcggc
aagctgagccacagcaatcccaccatcctgtttgactatattctgtcacagatccaatgg
tatgacaacctcattacacctgtggtggattcattgaaatacctcacttcactgaactat
gatgttctggcctactgcatcattgaagcactagccaacccagaaaaggagaagatgaag
catgatgacacgactatttcagcctggcttcagagtcttgcaagtctctgtggagctgtt
ttcaggaagtatcccattgagctggctggccttctgcagtatgtgacgaatcaacttaag
gcaggaaagagtttcgatctgctgatcctgaaggaagtggtccaaaagatggctggtatt
gagatcacagatgaaatgacaatggagcagcttgaggctatgacagggggtgaacagctt
aaggcagagggtggctactttggtcagatcaggaacaccaagaagtcatcacagcgtctt
aaagatgcccttctagaccatgacctggccctaccattatgtctgctcatggcacaacag
aggaatggtgttgttttctcagagggaggggaaaagcacctaaaactggtgggaaagctc
tatgaccagtgccatgatacattggtccagtttggtggcttcttagcttccaacctcagc
acagaagactacatcaaacgtgtaccccccattgatgtcctgtgcaaccagttccacaca
ccccatgatgctgctttcttcctatctcgacctatgtacgcccatcagatactgtctaag
tatgatgaactgaagaaggcagagaaaggcaaccggcagcagcagaaagtgcacaagtac
atcactgcctgtgaaatggtcatggcacctgtgcatgaggctgtagtgtccctccacccc
ccaaaggtgtgggatgacatcaggccccagttctatgccactttttggtcactgaccatg
tacgacctggccgtgcccagcagtgcttacgacagagaagccaataagctcaaggcacag
atgaaagccattgatgaaaatcaggaaatgcccttgaacaagaagaaaaaagaaaaggag
cgttgcactgcacttcaggataagcttcaggaggaggagaaaaagcagttggagcatgtg
cagagagttctgcatcggctcaagttggaaaaggacaactggctgttggccaaatcgaca
aagaatgaaacaattacaaagttccttcagctctgcgtttttccacgttgcatcttctct
gcaattgatgcagtgtattgtgcacggtttgtggagctggtacatcagcagaagacacct
aacttttgcaccttactctgctatgaccgagttttctcggacataatttatacggtggcc
agctgcacagagaatgaggctcgacgttatggccgcttcctgtgctgcatgctggagact
gtgacccgttggcatagtgaccgtgccatctatgaaaaggagtgtggcaattacccaggg
ttcctcaccatctttagagcaactggctttgatggtgggaacaaagcagaccaacttgac
tatgaaaacttcagacatgttgtgcacaaatggcattacaagttaactaaagcctctgtc
cattgtttggagacgggcgagtacacacacatccgcaacatccttattgtgttgaccaag
atactaccctgttaccccaaagtgctgaacctgggtcaggcgctggaatgccgtgtcctt
aagatctgccaggaggagaaggagaagaggcctgatctctatgcgttggctatgggctat
tctggccagttgaaaagcaggaaggtacacatggtccctgaaaatgagttccatcacaag
gagcagccagtgcgcagtgctaccccggcaaacatccagaatggaccaggcagtgccagc
aaacctgcaccaacaaagccagaggatggcatgactgatgatgcagataaatccaaggat
aaatctcagggggcttctaaacctgcaaacaaagccaacagcacagcgaccaaagtcgcc
acgagcaatggaaacagtgctccaaatagcaccaaagctgttaaagaaaaagatgacaag
gaaaaaagtgtgaaagagaagaaggagaagaaagaaaggacaccaggtagcactccagag
accaaagcagtggggaaggacaagctgaaagaggagaggcttggcaaggatgagaaggcg
cgtgatggcaaagagaggactccaaagacgagtgaggataagatgggaaaagaagaaaag
gccagggccagctgcaacctagaatttagatctgataaggagtcatccagggagcgagat
gtgtctaaggagtccaagatgaaggacagcagcaagggagagaagggctccacagcggca
tccttgaagtcacctgtccctcgatctgagtccgctgagtctgagcgtgaacaaaagagg
cgaaaactcgacacccactcgtcaccatcacactcctctactgttaaggacaatctcaac
gaactcaaggattcttcgtcaaagcactacgtcaaccacaacacagccacacaatccaag
agcaaagaaagggagatggacaagaaagattcagagaaatccagagaccgatccaaagaa
agagaaaaaaaagaagataaagacaggaaggacagaaaacgagatcattcaaacagtgat
cgcgaaatgagtcaagagctgaagcgcagaaaagatgaaaatggaacaaattcctctaaa
cacagcaagagtgcaagccctgtagactcgccacgtcccacggacaaggacaaaagcaag
agctcaaagtcatccagcaaggaaaagactgacccagcaaaacctgaaaggaactccact
ggaggcaaaaaggaatcgagacatgacaaagaaaaatctgtgaagaaagaaaaaagggac
agcagtggtgggaaagaagacaaaaaacatcataaatcctctgagaagcacagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (57)   

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