KEGG   Scleropages formosus (Asian bonytongue): 108934435
Entry
108934435         CDS       T04919                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
  KO
K03125  transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108934435
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sfm01001]
    108934435
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfm03021]
    108934435
   03036 Chromosome and associated proteins [BR:sfm03036]
    108934435
Enzymes [BR:sfm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     108934435
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     108934435
Protein kinases [BR:sfm01001]
 Serine/threonine kinases: Other
  TAF1 family
   108934435
Transcription machinery [BR:sfm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108934435
Chromosome and associated proteins [BR:sfm03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    108934435
SSDB
Motif
Pfam: DUF3591 Bromodomain TBP-binding zf-CCHC_6 Cac1_C Ribosomal_L44
Other DBs
NCBI-GeneID: 108934435
NCBI-ProteinID: XP_018607778
UniProt: A0A8C9R859
Position
4:29753701..29775209
AA seq 1972 aa
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEDDSVLDTESKKHLAGLGSLGLGTLITEIT
ASEEDVAEEERDPSGTDAEGWVKSTEDAVDYSDINEVAEDETRKYRQAMGSLQPSRRTDD
EDDYDADCEDIDAKLMPPPPPPTLQTSGKKEEQSTQPANAVGDEGDGIILPSIIAPSSVG
DRVDFSSSSDSESETDRPAQGPGIGGPPGSLTLPLAGIMHRDAAKALPCVTELFPEFRPG
KVLRFLRLFGPGKNMPSVWRSARRKRKRKHRDPQPGTPPPEAEPVEPSPEKKSGWAYEYA
PPPPPEQCLSDDEITMMAPVESKFSQSAGDGDKIPESRPKVAEWRYGPAQLWYDMLGVAE
DGGGFHYGFRLREETSEKPGEQEPKPVPAQEESDVDNDDQTLENELFLMVTQLQWEDDII
WNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLSRSNSQLVPPTPPPITKAPTI
SSGSSKRDKHNQDQQASHEDDSPWFSIFPIDNEELVYGRWEDNIIWDDQSMDRLLSPPVL
TLDPNDENIILEIPDEKEEQTSNSPSKENKKESALKKSRILLGKTGVIKDEPQQNMSQPE
VKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRLFHRPSL
KKYSYGTLSQPGPHPVQPLLKHIKKKAKMREQERQASGGGDMFFMRTAQDLTGKDGDLIL
AEYSEEYPPLIMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLL
QAFENNLFRAPIYLHKMPETDFLVLRTRQGYYIREVVDIFVVGQECPLFEVPGPNSKRAN
THIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSN
WWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSFFAPEEENEEDFQ
MKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKVPNKPTQQKDDKE
PQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSG
EGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEM
GKNIENMLQNKKTSSQLSHEREEQERKQLQRMLMGEESDRDKGRKERRKGLSSAHSTSSH
KDDDASSVTSLTSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYTRIRTTKDDEF
IRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKFKGPPEKKAKKVKERPDLKLKCG
ACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVL
GKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNKPHKSIHRRRTDPMVTL
SSILEGIINDMRDHPNTYPFHTPVNGKVVKDYYKIITRPMDLQTLRENVRKRMYPSREEF
RESVELIVKNSATYNGAKHPLTQVAQSMLDLCDEKLKEKEDRLVRLEKAINPLLDDDDQV
AFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLENIRKNISKHKYQNR
ETFLNDVSLIHTNSVKYNGSDSPYTKTALEIVNVCKQTLAEYDEHLTQLEKDISTAKEAA
LDAADLESLDPMTPGPYTPQPPDLYDSSNSMGLHREASLFVDGPPASTPEKRGGQGRHGR
GRLGEEESDVDIEGFEEDDDGKPKTPAPAEDGEGDLEDEDDDEDMLLPPRRRLHGHDEDD
EEDEGSSRPAQASVLYQDLLMSDGEDDASEEEGDNPFSSIHLSESGSDSDREVETRGAPS
RGHQEMARMGLEQEESMMSYEGEGADEGQMEDSNVSYGSYDEAEGRTQRQARGLASGEGY
GQSEDDEEDDEEESGARRRGPSVLSQVQLSEDEEDSEEFRSIGGDSDMDSDA
NT seq 5919 nt   +upstreamnt  +downstreamnt
atgtcagactcagacagtgatgaggaccaggatcgtccattctctctcactggcttcctt
ttcggaaacatcaatgaagatggtcagctagaagatgacagcgtgctggatacggagtcc
aagaagcacttggctggtttggggtccttgggcctgggtacgctcatcactgaaatcact
gccagtgaggaagatgtggctgaagaggaaagggatccaagtggtactgatgcagaaggc
tgggtaaaaagcacggaggatgctgtggactactcagacatcaatgaggttgccgaggat
gagaccagaaagtaccgtcaagccatgggctctctgcagccctccaggagaacagatgat
gaggatgactatgatgctgattgtgaagacattgatgcaaagttaatgcccccaccaccg
ccacccactttgcagacctcaggcaagaaagaggaacaatctactcagcctgcaaatgca
gtgggggatgagggagatgggatcatactgccctccatcattgctccatcatctgttggt
gacagggtggatttcagcagctcttcagattcagagtctgaaacagacaggccagcccag
ggtcctgggattggggggcctcctggtagcctgacgctgccccttgcaggcatcatgcat
agagatgctgccaaggccctgccttgtgtcactgagctctttcccgaattccggcctggg
aaggtgctgcgcttcctccgcctgtttggcccagggaagaacatgccatctgtttggcgt
agtgcccgtaggaagcgcaaacggaagcaccgtgacccacagcctggaacgcctccacct
gaggccgaaccagtggagccaagccctgagaagaaatcaggatgggcctatgagtatgcc
ccacctccacccccagagcagtgtctttctgatgatgagattaccatgatggctccagtg
gagtccaagttttctcagtcagctggcgatggggataagattccagaatctcgcccaaag
gtggcagaatggcgctatgggccagcccaactgtggtacgacatgctgggtgttgcagaa
gatgggggtggcttccactatggcttccgtttgagagaagaaacatccgagaagccaggc
gagcaggaaccaaagcctgtgccggcccaagaggagagtgatgtggataacgatgaccag
actttggagaacgagctcttcttaatggtgactcaactgcaatgggaagatgatatcatc
tggaatggagaggatgtgaagcacaagggtactaagacacagcgtgccagcctagcagga
tggctgccatctagcatgactcgcaatgctaatgcatataacgcgcagcagggtcttagc
cgcagtaactctcagttggtgccccccactccccctcctatcacaaaagcacccactatc
agctctggatccagtaagcgggacaaacacaaccaggaccagcaagcttcccatgaagat
gattccccatggttctccatcttcccaattgataatgaggagttggtgtatggacgctgg
gaggataacatcatctgggatgaccaaagcatggatcgattgctttctcccccagtcctc
acgctggaccctaatgatgaaaacataattttggaaatccctgatgagaaggaggagcaa
acatcgaactctccatccaaagagaacaagaaagaatcagccctgaagaagagtcgcatc
ctactgggaaaaactggtgtaatcaaggatgagcctcagcagaacatgtctcaaccagaa
gtaaaagacccctggaacctgtccaatgatgagttctattaccccaagcagcaaggtctt
agggggacttttggtggcaacatcatccagcactccattcctgctgtggagttgaggcag
cctttcttcccaacacacatgggtcccatgaagctgcggctgttccatcggccatcactg
aagaaatactcttacggaaccctttctcagccaggtccccatccagtacagcccctcctc
aaacacatcaaaaagaaggccaagatgcgagagcaggagcgccaagcttcaggtgggggg
gatatgttcttcatgcgtacagctcaggacttgacaggcaaggatggcgacctgatccta
gcagagtacagtgaagaataccctcctctcatcatgcaagtaggcatggccaccaagatc
aagaactactacaagagaaaacctgggaaagaccctggagcaccagactgtaaatatggg
gaaactgtctattgccatacttcgccattccttggttctttgcatcccggccagctgctg
caggccttcgagaacaaccttttccgtgcccccatctatctgcacaagatgcctgagacg
gatttcctagtgttgcgcacgcggcagggttactacattcgtgaagtggtggatatcttt
gtggtgggtcaggagtgtccattgttcgaggtacctggtcccaactccaagagagccaac
acccacataagagacttcctgcaggtgttcatttatcgcttgttctggaagagcaaagat
cgacctcggagaatccgcatggaagacatcaagaaggccttcccatctcattcagagagc
agcatccgcaagcgccttaaactctgtgctgactttaagcgcacaggaatggactctaac
tggtgggtcctgaagccagacttcaggctgcccacagaggaagagatccgagctatggtc
tccccagagcagtgttgtgcctactacagcatgctggtggcagagcagaggctaaaggat
gctggatatggagagaagtccttctttgcaccagaggaggagaatgaagaagacttccag
atgaagatagatgatgaggtgcgcacggccccctggaacaccacacgagccttcattgct
gccatgaaggggaagtgcctgctggaagtcacaggcgtagcagacccaactggctgcggg
gagggtttctcctatgtcaaggttcccaacaaaccgacacagcagaaggatgacaaggaa
cctcagccagccaagaaaactgtgacaggcacagatgctgacctgagacgtctgtctctc
aagaatgccaagcaactgctgcgcaaatttggggtcccggaagaagagattaagaagcta
tcgcgttgggaggttatcgacgtggtacgtaccatgtccacagaacaggcacgctcaggc
gagggaccaatgagcaagtttgctcgagggtcacgcttttcagtggcagaacatcaggag
cgctacaaggaggaatgtcaaagaatctttgacttgcagaacaaggttctggagtcaact
gaggtcctctcaacagacacagacagcagttcggctgaagacagcgactttgaagaaatg
ggcaagaatattgagaatatgctgcagaacaagaagacaagctcccaactctcccatgag
agggaggagcaggagagaaagcagctgcagaggatgctgatgggggaagagagtgaccga
gacaaggggcggaaagaacgccgcaaggggttgtcaagtgcccactctaccagctcccac
aaagatgatgatgcctcttctgttaccagcctgacctcctctgccactggaagaaggcta
aagatataccgcacctttagggatgaggacggcaaggaatatgtgcgctgcgagacggtc
cgcaagcccgctgtcattgatgcgtacacccgtatccgtactaccaaggatgacgagttt
atacggaagtttgcactctttgatgagcaacaccgagaggagatgaggaaggagcgacgg
cgcatccaagaacagctgagacgactcaaacgtaaccaggagaaggataagtttaaggga
ccccctgagaagaaagccaagaaggtcaaagaacgtcctgaccttaagctgaagtgcggt
gcttgcggtgccataggccacatgcgcaccaacaagttctgtccactatactaccaaacc
aacgctccaccttccaacccggtggcaatgacagaagagcaggaggaagaactggagaaa
acagtcatccacaatgataatgaggagctgattaaagttgagggtaccaagattgttttg
ggaaaacaactcattgagagtgctgacgaggtacgcaggaagtctctagtactgaagttc
cccaaacagcagctaccacccaagaagaagaggcgcgtgggaaccacagtgcactgtgac
tacttgaacaaacctcacaagtccatccacaggcgacggactgaccccatggtcacgttg
tcatctattctagagggcatcatcaatgacatgcgggaccaccctaatacgtatccattt
cacactcctgtcaatggcaaggtggtaaaggactactacaagatcatcacaaggcccatg
gacttgcagacactacgggagaacgtgcggaagcgcatgtacccctcgcgagaagagttc
cgtgagagtgtagaactaattgtcaagaacagtgccacatacaacggtgcgaaacaccct
ctcacccaggtggcccagtccatgttggacctctgtgatgagaagctcaaagagaaagag
gacagactggtaaggctggagaaagccatcaatcccctgttagatgacgacgatcaagtg
gccttctcctttatcttggacaacattgtcacccagaagatgatggctgtcccagattcg
tggcccttccatcatcctgtaaataagaagtttgtaccagattattacaaggtgattgcc
aaccctatggacctggagaacattcgcaagaacatctcaaagcataagtaccagaatcga
gagacattcctgaacgatgtcagtcttatccacaccaacagcgtaaagtataatggctcc
gacagcccttacaccaagactgccttggaaattgtgaatgtgtgtaagcagactctggca
gagtacgatgagcacctgactcagctggagaaggatatctccactgccaaggaagcagcc
cttgatgcagctgaccttgagagcctggacccaatgacccccggcccctataccccacag
cctccagacctctatgacagcagcaattcaatgggtctacacagggaggccagcctgttc
gtggatggccctcccgcctctacccccgagaagaggggggggcagggccgccatgggcgc
gggaggctaggcgaagaggaatcagatgtggacatcgaagggtttgaggaggatgacgat
ggcaaacccaagaccccagctcctgcagaagatggcgaaggtgaccttgaggatgaggat
gatgatgaggacatgctgctgccgccaagaaggcgtctgcatggacacgatgaggacgac
gaggaggatgagggttccagccgtcctgcccaagccagtgtgctgtatcaagacctgctt
atgtctgatggggaggatgacgccagtgaagaggagggcgacaaccctttctcctccatc
cacctgtcagagagcggcagcgactcagaccgtgaggtagagacaaggggagccccatcc
aggggccaccaggagatggcacgtatggggctggagcaggaagagagcatgatgtcatac
gagggcgagggtgcggacgagggccaaatggaggacagcaatgtcagctatggcagttat
gatgaagccgagggacggacacagagacaggcccgcggcctggccagtggtgaggggtac
gggcaaagtgaagacgatgaggaggatgatgaagaggagagcggagcacggaggcgcggc
cccagtgtcctgtcacaagtacagctgagtgaggatgaggaagacagtgaggaattcaga
tctataggtggggacagcgacatggactcagatgcctag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (75)   

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