KEGG   Scleropages formosus (Asian bonytongue): 108938562
Entry
108938562         CDS       T04919                                 
Symbol
rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03320  PPAR signaling pathway
sfm04148  Efferocytosis
sfm04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    108938562 (rxra)
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    108938562 (rxra)
   03320 PPAR signaling pathway
    108938562 (rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sfm03000]
    108938562 (rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sfm03310]
    108938562 (rxra)
Transcription factors [BR:sfm03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    108938562 (rxra)
Nuclear receptors [BR:sfm03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   108938562 (rxra)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4
Other DBs
NCBI-GeneID: 108938562
NCBI-ProteinID: XP_018614702
Position
17:complement(10630482..10726421)
AA seq 542 aa
METKPFLSLGNSPTSRSSRWKPSSREELPDWSTLLLPRSHSRGFLKPQCSLPPPSQHGRS
MESESSPTACSCFTGMCPLHQRRISTDSSSQLSPSSLGSPTAHPLHPSLLSPTSMGSSGQ
LHSPICTLNSPINGLGSPFSVISSPMGHHSMPAPPTSAMGFGPSISPQLNSPMNPVSSSE
DIKPPLGLNGVMKVPAQPSGTSLSHTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLTYTCRDNKDCTIDKRQRNRCQYCRYQKCLAMGMKREVLLNTAVQEERQRAKDRNENEV
ESTSSANEDMPVEKILEAELAVEPKTETYIEGNLSVPSNSPNDPVTNICQAADKQLFTLV
EWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSA
GVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASL
EAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQ
MT
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggaaactaaacctttcctatctctggggaactcgccaacctctcgcagcagcaggtgg
aagccctccagcagagaagaactcccagactggagcacacttctcctgccccgtagccac
tccagagggttcctgaaaccccagtgttcactaccgccaccgtctcagcatggccgttct
atggagtctgagagctcaccgactgcctgctcctgcttcactggcatgtgcccacttcac
cagcgacggatatctacagactcctcaagccagctgtccccctcgtccctgggctcaccc
acagcacacccgctacacccgtcccttctcagccccacctcaatgggctcctctggccag
ctccactcacccatctgcaccctcaactcgcccataaacggcctgggttcgcccttctcc
gtcatcagctcgcccatgggccaccactccatgcctgcgcccccgacttcagccatgggc
tttggccccagcatcagtccacagcttaactccccaatgaacccggtcagcagttcggag
gacatcaagcccccactgggtctgaatggggtgatgaaggttccagcacagccctcaggc
acctcactctcacacactaaacacatctgtgctatctgtggagaccgctcctcggggaag
cactacggagtgtacagctgtgaaggttgcaagggcttcttcaagaggacagtgagaaag
gacctaacctacacctgccgtgacaacaaggactgcaccattgacaagcgtcagcgtaac
cgctgtcagtactgccgctaccagaagtgtctggccatgggcatgaagagagaagtcttg
ttaaatacagctgtccaggaggagcgtcaacgagcgaaagaccgcaatgaaaacgaggta
gagtccaccagcagtgccaatgaggacatgcctgtggagaagatactagaggctgaactc
gctgtagagcccaagacagaaacctacattgagggcaacttgagtgtgccctccaactcg
cccaacgaccctgtcaccaacatctgccaagccgcagacaagcagctgttcaccctggtc
gaatgggccaaaaggatcccgcacttctccgagttgccccttgacgatcaggttattctc
cttcgagcaggctggaatgaacttctcatcgcgtcattctcacaccgctcaatagcagtg
aaggatggcatcttgttggccactggccttcacgtccatcgcaacagtgcccacagcgcg
ggagtcggcgccatctttgacagagttttgacggagttggtgtccaagatgagagacatg
cagatggacaagacggaactcggctgccttcgtgccattgtcctcttcaatccagactct
aaaggtctatcgaaccccggagaggtagaagcactgagggagaaggtatacgcttcacta
gaggcctactgcaaacacaagtatccagaccagcctggaaggtttgccaaacttctgctg
cggcttcctgccctgcgctccattggcctgaaatgtctggaacaccttttcttcttcaag
ctgatcggtgacacgcccatcgacacctttctcatggagatgctggaagcgccacaccaa
atgacttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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