KEGG   Scleropages formosus (Asian bonytongue): 108939557
Entry
108939557         CDS       T04919                                 
Symbol
kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
  KO
K04936  potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    108939557 (kcnma1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sfm04040]
    108939557 (kcnma1)
Ion channels [BR:sfm04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   108939557 (kcnma1)
SSDB
Motif
Pfam: Slowpoke_C BK_channel_a Ion_trans Ion_trans_2 TrkA_N SR-25
Other DBs
NCBI-GeneID: 108939557
NCBI-ProteinID: XP_018616470
Position
24:20069299..20216496
AA seq 1288 aa
MLATLDGNGTGSATMSNNINRQKVDFPSVHMSKMDVVIPFSPEVPCDNSNGQRMWWAFLA
SSMVTFFGGLFIILLWRTLKYLWTVCCHCNMKNKEAQKVNNPTGGQTNGTSKNLDEKEPE
ATASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCHIFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQALSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLST
MLANLFSMRSYVKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLL
IAIEYKSDQRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRI
KKCGCKRLIYSKMSVYKRMRLACCFDCGRSERDCSCMSGSVRSNMDTLQRAFPLSPVSVN
DCPTSLRAFEEEHPSTLSPKKKQRNGGMRSSPNCSPKMMRHDPLLIPGNEQIENMDVNVK
RYDSTGMFHWCPSKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALVGLRNLVMPLRAS
NFHYHELKPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILS
ANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGL
PRQASITTGANIPIITELAKPGKLQPMISLSQDKNSGTNIQMITELVNDSNVQFLDQDDD
DDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEE
NALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYR
LRDAHLSGPSQCTKRYVITNPPYEFELVPSDLIFCLMQFDHNAGQSRTSLSHSSYSSHSS
SKKSSSVHSIPAANRQNRSKARDSREKHNATRMNRMGQEKKWFTDEPENPYSRNIQIKPM
STQMANQVNQCKSTSNLIPPIREVEDEC
NT seq 3867 nt   +upstreamnt  +downstreamnt
atgctagccacgctggacggcaacggcaccggcagcgctaccatgagtaataatatcaac
cgtcagaaggtggactttccctctgtccatatgtccaagatggatgtggttatcccgttc
tcgcctgaggtgccctgtgacaacagcaatggacagcgcatgtggtgggctttcctcgcc
tcctccatggtcactttctttgggggtctcttcatcatcctcctgtggaggaccctcaag
tacctgtggaccgtgtgctgccactgcaacatgaaaaacaaggaagcacagaaggttaat
aatcccacgggtgggcagaccaatgggacctccaagaacctggacgagaaggaacctgag
gccaccgccagcgaagtgggctggatgacatctgtcaaagactgggccggagtcatgata
tcggcacagacgctgactggcagagtactggttgtgctagtgtttgcgctcagcattgga
gcacttgtaatatacttcatagattcttctgaccccatagaatcctgtcacattttctac
aaagatttcacattacagatcgacatggctttcaacgtcttcttcttgttgtactttggt
ctgcgtttcattgcagcaaacgataagctctggttctggctggaggtgaactcggtcgtg
gacttcttcacagttccaccagtgtttgtttccgtctatttaaacaggagttggctcggt
ttgaggtttttaagggccttaagactgatacagttttcagaaattttacaatttttgaat
atcttaaaaacaagtaattccatcaagcttgtgaacttgtgttccatcttcataagcaca
tggctcaccgcagctgggttcatacatttggtggaaaactcaggggatccttgggaaaac
ttccagaattcccaggcactttcctactgggaatgtgtctacttgctcatggtcaccatg
tccactgtgggatacggagatgtttatgcaaaaaccacgctgggacgccttttcatggtc
ttcttcatcctcggtggtttggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcatatt
gtggtctgtggtcatataacacttgaaagtgtttccaacttcctgaaagacttccttcac
aaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccctaatctt
gagctggaagccttatttaagcgccactttactcaggtggagttttaccaaggatcagtt
ctgaatccacatgacttggccagagtgaagatagagtcagctgatgcttgcttgatcttg
gctaacaaatactgcgcggaccctgatgccgaggatgcctccaacatcatgagagtgatt
tccatcaagaattatcatccgaagatacgaattatcacacagatgttgcagtatcacaac
aaggcccatctgttaaacattcccagctggaactggaaagagggagatgatgcgatttgc
cttgctgagctcaagttgggtttcattgcccaaagctgcctggcccagggtctctccacc
atgcttgcaaacctcttttccatgagatcatacgtcaagattgaagaggatacctggcag
aagtactacctggagggagtagccaatgaaatgtacacagaatacctgtccagtgccttt
gtgggcctgtccttccctacggtttgtgaactgtgttatgtgaagctcaagctgttgttg
atagccatcgagtacaagtctgatcagagggaaagcagcacccttattaacccagggaac
catgttaagatgcaggagggcaccttagggttcttcatagccagcgatgccaaagaagta
aagagggcatttttctactgcaaggcatgtcatgatgacatcaccgatcccaaaaggatt
aaaaagtgtggctgcaaacggctgatatattccaagatgtccgtctacaaacgaatgaga
ctggcatgttgttttgattgcggacgctctgagcgtgactgctcgtgcatgtcaggcagt
gtacgtagtaacatggacacccttcagagagccttcccactttctcctgtctctgttaat
gattgcccaaccagtttacgtgccttcgaagaggagcatccatcaacgctgtcgcctaaa
aaaaagcagcgcaacggaggcatgcgaagttcaccaaactgctcgccaaaaatgatgcgg
catgaccccttgctcattcctggaaatgagcaaattgagaacatggatgtgaatgtgaag
aggtacgattccaccgggatgtttcactggtgcccgtcgaaagacatcgagaaagttatc
ctgacgcggagtgaggctgccatgacggttctgagcggtcacgtggtggtctgtattttc
ggggatgtcaagtctgccttggtggggctgcggaacctggtgatgcctttgagggcgagc
aacttccactaccatgagctgaagcccattgtgttcgtgggctccttggagtatcttaag
cgagagtgggaaacccttcacaatttccccaaagtctccattttacccggtacgccatta
agtcgggctgatttgagggctgtcaacatcaacctctgcgacatgtgcgttatcctgtca
gccaatcagaacaatatcgatgatgcttcactgcaggacaaggaatgcatcttggcatca
ctcaacatcaaatctatgcagtttgatgacagcattggggtcttgcaggctaattcccaa
ggcttcactcctccagggatggacaggtcttccccagataacagtccagttcatggatta
ccacggcaggcctccatcactactggagccaacatcccaatcataactgaactagccaaa
ccgggcaaattgcagcccatgatttcactgagtcaggacaaaaatagtggaaccaacatt
caaatgataactgaactggtgaatgactccaatgttcagttcctggaccaagatgacgac
gacgatccggacacagagctgtacctcacacagccgtttgcgtgcggaactgcgtttgca
gtcagtgtgctggactccctaatgagtgcgacatacttcaatgataatatcctcacgctg
atccggacgctggtaacaggaggagctacaccggagctggagggcctcctggcggaggag
aacgcgctgcggggcggctacagcacgccgcagacgctcgcaaacagggacaggtgtcgg
gttgcgcagctggcgctctacgacgggccctttgcagacttgggggatggcggatgctac
ggtgacctattttgtaaagcattaaaaacttataacatgctgtgcttcggaatttaccga
ttacgagacgctcatctgagtgggccgagccagtgcacaaaacggtatgtcataacaaac
ccaccgtacgagtttgagctggtgccctcagacctgatcttctgcctgatgcagttcgac
cacaacgcgggccaatcccggaccagcttgtcgcactcgtcctattcctcccactcgtcg
agtaaaaagagctcctctgttcactcgatccccgcggccaaccggcagaaccgcagcaag
gcccgagactccagggagaaacacaatgcaacaaggatgaatagaatgggccaagaaaag
aaatggtttacagatgaaccagaaaatccctactcaaggaacattcaaatcaagcccatg
agcacccaaatggccaatcaagtcaatcaatgtaagtccacaagcaacctgattccacca
atcagagaagttgaagacgaatgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (19)   
   RefSeq(pep) (19)   
DNA sequence (19)   
   RefSeq(nuc) (19)   
Protein domain (6)   
   Pfam (6)   
All databases (73)   

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