KEGG   Shigella flexneri 2003036: SFy_5799
Entry
SFy_5799          CDS       T03267                                 
Name
(GenBank) BirA
  KO
K03524  BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Organism
sfn  Shigella flexneri 2003036
Pathway
sfn00780  Biotin metabolism
sfn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sfn00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    SFy_5799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sfn03000]
    SFy_5799
Enzymes [BR:sfn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     SFy_5799
Transcription factors [BR:sfn03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    SFy_5799
SSDB
Motif
Pfam: BPL_LplA_LipB BPL_C HTH_11 BPL_LplA_LipB_2 HTH_24 MarR_2 HTH_5 FloA Rrf2 Mga
Other DBs
NCBI-ProteinID: AIL38417
Position
4181502..4182467
AA seq 321 aa
MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL
PEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQFLLDRIGELKSGDACVAEYQQAGRGRRG
RKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQ
DRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGINLDRNTLAA
MLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLL
EQDGIIKPWMGGEISLRSAEK
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaaggataacaccgtgccactgaaattgattgccctgttagcgaacggtgaatttcac
tctggcgagcagttgggtgaaacgctgggaatgagccgggcggctattaataaacacatt
cagacactgcgtgactggggcgttgatgtctttaccgttccgggtaaaggatacagcctg
cctgagcccatccagttacttaatgctgaacagatattgggtcagctggatggcggtagt
gtagccgtgctgccagttattgactccacgaatcagttccttcttgatcgtatcggagag
cttaaatcgggcgatgcctgtgttgcagaataccagcaggctggccgtggtcgccggggg
cggaaatggttttcgccttttggcgcaaacttatatttgtcgatgttctggcgtctggaa
caaggcccggcggcggcgattggtttaagtctggttatcggtatcgtgatggcggaagta
ttacgaaagctgggagcagataaagttcgtgtcaaatggcctaatgacctctatctgcag
gatcgcaagctggcaggcattcttgtggagctgactggcaaaactggcgatgcggcgcaa
atagtcattggagccgggatcaacatggcaatgcgccgtgttgaagagagtgtcgttaat
caggggtggatcacgctgcaggaagcggggatcaatcttgatcgtaatacgttggcggcc
atgctaatacgtgaattacgtgctgcgttggaactcttcgaacaagaaggattggcacct
tatctgtcgcgctgggaaaagctggataattttattaatcgcccagtgaaacttatcatt
ggtgataaagaaatatttggcatttcacgcggaatagacaaacagggggctttattactt
gagcaggatggaataataaaaccctggatgggcggtgaaatatccctgcgtagtgcagaa
aaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (29)   

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