KEGG   Shigella flexneri 2003036: SFy_6199
Entry
SFy_6199          CDS       T03267                                 
Name
(GenBank) YjeR
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
sfn  Shigella flexneri 2003036
Brite
KEGG Orthology (KO) [BR:sfn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfn03019]
    SFy_6199
   03009 Ribosome biogenesis [BR:sfn03009]
    SFy_6199
Messenger RNA biogenesis [BR:sfn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SFy_6199
Ribosome biogenesis [BR:sfn03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    SFy_6199
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AIL38711
Position
4484854..4485399
AA seq 181 aa
MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEVYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaatctgaatattctg
gcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtagagcgcgtgaaagcgagcacgatg
ggcgatcgggaagctgaactggcaacgctcgaattcttaaaacagtgggtgcctgcggga
aaatcgccgatttgcggtaacagcatcggacaggaccgtcgtttcctgtttaaatacatg
ccggagctggaagtctacttccactaccgttatctcgatgtcagcaccctgaaagagctg
gcgcgccgctggaagccggaaattctggatggttttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaag
ctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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