KEGG   Staphylococcus felis: C7J90_11430
Entry
C7J90_11430       CDS       T05459                                 
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
sfq  Staphylococcus felis
Brite
KEGG Orthology (KO) [BR:sfq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfq03009]
    C7J90_11430
Enzymes [BR:sfq01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     C7J90_11430
Ribosome biogenesis [BR:sfq03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    C7J90_11430
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Cons_hypoth95 Methyltransf_25 MTS Methyltransf_15 TRAM PrmA Met_10 N6_N4_Mtase Methyltransf_11 Caudo_bapla_RBP DREV Methyltransf_32 NodS
Other DBs
NCBI-ProteinID: AVP37514
UniProt: A0A2K3ZIL9
Position
complement(2390862..2392223)
AA seq 453 aa
MSVVEKNNVYEGRVVDFTHEGHGVIKMERYPIFVPRVLVNEWVSFKIIKVKKNFAIGRLV
EVKERSASRVEPPCQYFYKCGGCQLQHISYETQLDMKREQVINLFERKGKFSNIKIKDTV
GMQNPWTYRNKSQIPVGIDKEGKVKMGFYRQRSHDIIDIDECLIQYDEQDAIMGFLKQTI
QKYHIKPYQEEKHKGLLRHVVIRKGHFTNEVMVIFVLNGTKLPHQEALIQDLITQFPHIT
SIKININTEKSNVIMGKTSHTLYGKEVIIDYLNDVTFEISDLSFYQINVTQTQKLYTIAK
NYAQLTGEEIVLDTYCGIGTIGLMMAPYAKHVYGVEVVKEAIEDAKRNALNNQMANTTFE
VGAAEDVMLRWKEEGIKPDVVTVDPPRKGCDETFIQTLLELEPERIVYISCNPSTQLRDV
QLLSDKYVIKEITPVDMFPQTTHVETVALLTKK
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtcagtagttgaaaagaacaatgtatatgaagggcgcgttgttgattttactcatgag
ggccacggagtgatcaaaatggagcgatatcccatttttgtacctcgagtgttagtgaat
gaatgggtgtcttttaaaattataaaagttaaaaagaactttgcaattggacggctggtt
gaagttaaagagagaagcgcatctcgcgttgaaccaccatgtcagtatttttacaaatgc
ggaggctgtcagttgcagcatatatcttatgaaacgcaactggatatgaaaagagaacaa
gtcatcaatttatttgagcgaaaaggaaaatttagtaatataaaaattaaagatacagtc
ggtatgcaaaatccatggacataccgaaataaatcacaaatacctgtaggcatcgacaaa
gaaggaaaagtgaagatgggtttttatcgtcagagaagtcacgatattatcgatattgat
gaatgtctgattcaatatgatgaacaagatgcaatcatgggatttttaaagcagacgatt
cagaagtatcatattaaaccttatcaagaggaaaagcacaaggggttattgcgtcatgtt
gtgattagaaaaggacattttactaatgaagtaatggttattttcgtacttaatgggaca
aaactccctcatcaagaagcattaatacaggacttaatcactcaatttcctcatattaca
agtattaaaatcaatatcaatacagaaaaatcaaatgtcattatgggaaaaacttcacac
acattatatggaaaagaggtaatcattgattatttaaatgatgtcactttcgaaattagc
gatttatcattttatcaaattaatgtgacacaaacacaaaagctatatactattgccaaa
aattacgctcaattgacaggagaggaaattgttctcgatacgtattgcggtatagggaca
attggactaatgatggcaccatatgctaaacatgtttatggtgttgaagtcgtaaaagaa
gcgattgaagatgctaaacgaaacgctttaaataatcaaatggccaatacaacatttgaa
gtaggagcagcggaagatgttatgttacgttggaaagaagaaggtatcaaaccggatgtg
gttacagtcgatccacctcgaaaagggtgtgatgagacatttattcagacgctactagaa
cttgaaccagaacggattgtctatatttcatgtaatccaagtacgcaattgagagatgta
caacttctttcggacaaatatgtcatcaaggaaattacaccggtagatatgtttcctcaa
acaacgcatgtcgaaacggtcgctttattaaccaaaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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