KEGG   Shewanella frigidimarina: Sfri_2373
Entry
Sfri_2373         CDS       T00395                                 

Definition
(GenBank) ImcF domain protein
  KO
K11891  type VI secretion system protein ImpL
Organism
sfr  Shewanella frigidimarina
Pathway
sfr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Sfri_2373
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfr02044]
    Sfri_2373
Secretion system [BR:sfr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Sfri_2373
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C YajC AAA_33 DUF4131
Other DBs
NCBI-ProteinID: ABI72218
UniProt: Q080U7
Position
complement(2825557..2829105)
AA seq 1182 aa
MSLKSIGKGIVDTLKSKWAITIIGFLCLALLIWFGGPLVAIAGYEPLASAATRVILLLVI
VIIFGAIHFTRQLKNKKQSEKMVDSLINGEEGNSVTGDDLAKSEITVLQNKMTQALDILK
NTKLTKNKSIYELPWYIMIGPPGSGKTTAIQHSGLEYPLKEKMGVDMIEGVGGTRHCDWW
FTNKAVLIDTAGRYTTQDSHVKQDSRAWQGFLGLLKKYRPVRPINGVIISMGMSDLLNQT
KTERNLHARAIKQRLQELQNQLGMTFPVYVLFSKSDLVAGFNEFFDDLTKEDCEQIWGIT
FPLNADTEDTDIVSSFNKEFHDLLLNLNARLNSRLKNERDLERRAAIYEFPKQLRLLQSS
ADDFLKEIFAPNAYEEAPLLRGVYLTSATQEGTPIDHLSSHLSSGIKSKAKTFAANKQRS
YFIKRLLEDVIFPEKNLASTNRKHTNHNKLLRKVSVGIAAGVTLLASYVWWQSYDWNRQL
IDDTYQGVTTYKTITSGGLNAKSDVITLTKGLTLIRDLPVGFGTDKPEDAYTFGLYQGDK
LKQPATAAYHRALETHLMPYLQSVLSAEMDANGEHLNYLYETLKTYLMLYFPEHFDKSDV
QVWFSAYIDRNIVGDVNGEVRKELNKHIDTLLSLGVRGHQYDSMTVDSARINLTMLPLVE
RAYQRLKSDFSNSSIPDFKLVDILSLDSLDGLVFTSGRQFNQGIPGLYTFNGFHGIFSIE
KNKIIKNLTADSWVYGDELVDLDEQAKAQITQELENRYIRDYIFYWEDFLSDLAIKPYST
REEAESVTAALASPDQPIKTIITAVQKNVNLTKLPADSNNLKAAAEVAGNISDVAFRSKK
ARLNRLLPDTAIELDIDLPGKDVEFAFAELLKINPADIDKIQTTLRALNRNYNKLSMQSE
GQGNVVNQATEESFAQLGSSLSEQLMDLPYPVKNWLSEVAYRTRSFAKSNQSQRFNGIWR
SQVLAEFNRAIAGRYPFDRKSSEDVRLKDFSKFFGYGGTLDKFWDQYLASHVDTSKKPWR
FKRNIGIRNDILEMYQRAEIIKEAFFEPGSKQPIVNFSLEPELLDRSVSMFLFEIDSQQL
KYRHGPTRKELFTWPGPGANNETRIAFSPPNGGRSINKKYEGEWSFFKLLDELSKKRPQT
KKDGKLLINLKGYNAVLKLTANSVNNPFWMANMEKFRCPANL
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgtctttaaaatcaattggcaaaggaattgtcgacacacttaagtctaaatgggcaatt
accataataggttttttatgtttggctttacttatttggtttggtggtcctttagtggct
atagctgggtatgaaccattagcatcagcagcaacacgggttatcttactactggttatt
gttattatttttggtgccattcactttactcgacaactcaagaataaaaaacaaagcgag
aaaatggttgatagcttaattaacggtgaagagggtaactctgtgaccggtgatgactta
gccaaaagtgaaatcactgttttacagaataaaatgacccaagcgttagatattcttaaa
aataccaagctaactaaaaataaaagtatttacgaattaccttggtacatcatgattggt
ccgccaggaagtggaaaaaccaccgcgattcagcattcaggtcttgaatacccattaaaa
gaaaaaatgggtgtagatatgattgaaggcgttggcggtacaagacactgtgattggtgg
tttaccaataaagcagtattaattgatacggcgggtcgttataccactcaagatagtcat
gtaaaacaagactctcgggcatggcaaggttttctggggttattgaaaaaatatcgccct
gttcgtcctattaatggggtgataatcagcatgggtatgtctgatttattaaaccaaacc
aagactgagagaaacttacatgcgcgagcaattaagcagcgtttacaagaactgcaaaat
caactgggtatgacttttccggtatatgttttattttctaaatcagatttagttgccggt
tttaatgagttttttgatgatttaaccaaagaagattgtgaacaaatttggggtattacc
ttcccattaaatgcagatacagaagacactgatattgttagttcatttaataaagaattt
catgatttattattaaatttaaatgcaagattaaatagccgcctaaaaaacgaacgcgac
ctagagcgtcgtgcggccatctatgagtttccaaagcagcttcggttattacagagctca
gcagatgattttcttaaagaaatttttgcgcctaatgcatatgaagaagcaccgctattg
cgtggtgtttacttaaccagtgcaactcaagaaggtacgccaatcgatcatctttctagt
cacttatctagtggcattaagagtaaagctaaaaccttcgccgcaaataaacaacgcagc
tattttattaaacgcctgttagaagacgttatttttccagagaaaaatttagcatcaacc
aatcgaaagcatacaaaccataataaacttttacgtaaagtatcagtaggcattgctgca
ggtgtgaccttgcttgctagttatgtttggtggcaaagttatgattggaatagacaattg
attgatgatacctatcaaggtgtcacgacatacaaaaccattaccagtggtgggttaaat
gctaagtcagatgtgattacacttaccaaaggcttaacattaattcgtgatctccctgtt
ggttttggtactgataaacctgaggatgcatatacctttggtttgtatcaaggagataag
cttaaacaacctgctacagcggcttatcaccgtgctttagaaacacatttaatgccttac
ctacaaagtgtgcttagtgcagaaatggacgctaatggtgagcaccttaactacctatat
gaaacattaaaaacctatttaatgttgtattttcctgagcattttgacaaaagtgatgtg
caagtctggttctccgcttatatcgatagaaacattgttggtgatgtaaatggtgaggtt
aggaaagagctaaataagcatatagatacattactgtctttaggggttagaggtcatcaa
tacgacagtatgacagttgatagtgctcggattaatttgaccatgttacctctggttgag
cgcgcatatcagcgtttaaaaagtgatttttcaaacagcagtatcccagattttaaactg
gttgatattctgagtttagacagtttagatggtttggtgttcaccagtggtcgccaattt
aatcaaggcattcctggtctttatacttttaatggttttcatggcatttttagtatagaa
aagaataagataataaaaaacctaaccgcagacagttgggtatatggtgatgagttagtt
gatttagacgaacaagccaaagcgcagattacccaagagttagaaaacagatacattcgt
gattatattttctattgggaagatttcttaagcgaccttgctatcaaaccatattcaaca
cgtgaggaagctgagagtgttactgcagcacttgctagcccagatcaaccgatcaaaacc
attattaccgcagttcagaaaaatgtgaatttaactaagcttcctgccgattcaaataat
ttaaaggccgcggcggaagtggccggtaatatttctgatgttgcatttcgatctaaaaaa
gcacgattaaataggctattacccgatacagcaatagagttagatattgatttgccgggc
aaggatgtggaatttgcttttgcagaattgctcaaaatcaatcccgctgatattgataaa
attcaaacgacgttacgcgctcttaatcgaaactacaataaattatcaatgcagtcagaa
ggacaaggtaacgttgttaatcaagccacagaagaaagctttgctcaactaggttctagt
ttatctgagcaattgatggatctaccttatccagtaaaaaattggttaagtgaagtggct
tatcgtactcgctcgtttgccaaatccaatcaaagtcagcgtttcaacggtatttggcgt
tcgcaagtgttggccgaattcaatcgagcgattgcagggcgttacccatttgaccgaaaa
tcgtcagaagatgtcagactaaaagacttcagtaagttttttggttatggcggcacctta
gataaattttgggatcaatacctcgcttcacatgtagataccagcaaaaaaccttggcgt
tttaagcgtaatatcggcattcgtaatgacattttagaaatgtatcaacgcgctgaaatt
attaaagaagcatttttcgaaccaggatctaagcagcctattgttaacttttcattagaa
ccggaattattagatagaagtgtgagtatgtttttattcgaaatagacagccaacagctg
aagtatcgacacggtcctactcgcaaagagttatttacgtggcctggccctggtgcaaat
aacgaaacacgaattgcattttcacctcctaacggcgggcgctctatcaataagaaatat
gagggtgaatggtcattcttcaaattattagatgaattaagtaaaaagcgtccacaaact
aaaaaagatggcaagttactcatcaatctcaaaggctacaacgctgtactgaaattgacc
gcaaacagtgttaacaatccattttggatggcaaatatggagaagtttagatgtcctgcg
aacctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (41)   

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