KEGG   Shewanella frigidimarina: Sfri_2593
Entry
Sfri_2593         CDS       T00395                                 
Name
(GenBank) histone family protein DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfr03032]
    Sfri_2593
   03036 Chromosome and associated proteins [BR:sfr03036]
    Sfri_2593
   03400 DNA repair and recombination proteins [BR:sfr03400]
    Sfri_2593
DNA replication proteins [BR:sfr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Sfri_2593
Chromosome and associated proteins [BR:sfr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Sfri_2593
DNA repair and recombination proteins [BR:sfr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Sfri_2593
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 VWA_3
Other DBs
NCBI-ProteinID: ABI72434
UniProt: Q07ZY1
Position
complement(3100782..3101057)
AA seq 91 aa
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKDGDKISLVGFGTFEVRQRAERTG
RNPQTGKEIKIAAANIPAFKAGKALKDAVNS
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaaatctgaactaatcgagaaaatcgcatctggtgctgatatttctaaagctgct
gcaggccgcgcactagattcttttatcgctgctgtgacagaaggtcttaaagatggcgat
aagatttctctagttggttttggtacatttgaagtacgtcaacgtgctgaacgtactggc
cgtaacccacaaacgggtaaagaaattaaaattgctgctgcgaacattccagcgttcaaa
gctggcaaagcgctaaaagacgctgttaactcgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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