KEGG   Shewanella frigidimarina: Sfri_2629
Entry
Sfri_2629         CDS       T00395                                 
Name
(GenBank) DNA damage-inducible DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfr03400]
    Sfri_2629
Enzymes [BR:sfr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sfri_2629
DNA repair and recombination proteins [BR:sfr03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Sfri_2629
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2
Other DBs
NCBI-ProteinID: ABI72470
UniProt: Q07ZU5
Position
complement(3146439..3148817)
AA seq 792 aa
MTNTHVKGRVLTRHAIYRHGQLVLQYYIKTAEGPVLAELYHSEVICFCRQQDVDQLSQKV
GFALKAETISLLSFAHEPISALYLKSNTQLKLLGRIASDIGITLFEADIRPEQRYLIERF
IALDIECSGHYQERNPTSTIPLLSINRARKMPSNELVDIPLKMVSLDFECSFTGELYSVG
LYGADYQCVFMVGEPQAECHDFIVWVQNEVELIHHLIAWFSDYDPDIIIGWAVVTFDLAL
LFKRCVLHQIPLLIGRGHTELSWKVADKYRPETLSLPGRVVLDGIDWLKAAFYQFDSFSL
ESVSRQLLSEGKAIDHVENRGQEITHLFEQDKNALAFYNITDCRLVWDIFEKTQLLDFAI
ERAKLTGLEFGRVGASIAAFYHLYLPHLHRSGFVAPAQPASQGLESPGGYVMSSIPGYYK
DVLVLDFKSLYPSIIRTFLIDPKGLVEGLYAREVKGDATTVAGYLGAQFSRKSPILPALV
ASLAEQRELAKRDRNAPLSQAIKIIMNSLYGVLGSRGCVFHDAKLASSITMRGHQIMKLT
KQWIEECGYQVIYGDTDSTFVWLGDNHGIKDIQAVGKHLSVSITQRWLEWCVEEYQLDSY
LELEFETHFEQFIMPTLRGSDEGSKKRYVGAVSNDQQQLTLTFKGMEQVRSDWSPIARRM
QYHLYELFFKGEDVIDFLSNELAAIKCGARDNELIFKKRLRRNVEDYTAKSSPHVKAAKQ
LAELLGDVSVTRKGQQIRYIMTLTGAQTIEAKPQNIDYEYYICKQIKPIAEPILQLCGHS
FDSLVNNQLLLL
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgactaatacccatgtgaagggacgagtattaactcgccatgctatttatcggcatgga
caattagtccttcaatattatatcaaaaccgctgaaggacctgtattagctgaactatat
cacagtgaagtgatctgtttctgtcgtcagcaagatgtggatcaattaagtcaaaaagtc
ggctttgctcttaaggctgagacaatatcattgctgagttttgcacatgaacctatcagt
gcgctgtatcttaaatcaaatactcaattgaaattacttggtcgtattgctagtgatatc
ggtattaccttatttgaagccgatattaggcctgagcaacgctacctaattgaacggttt
atcgccttagatattgaatgctcagggcattatcaagagcgtaatccaacttcaactatt
cctttgttatcgattaatcgggctagaaaaatgcccagcaacgaactagtcgatatccca
ttaaaaatggtttcactggattttgagtgtagttttactggggaactttattcggttggt
ttatatggtgccgattatcaatgtgtgtttatggtgggcgaaccgcaagcagaatgtcat
gattttatcgtttgggtacaaaatgaggttgaactgatacatcatttaatagcgtggttt
agcgactatgatcccgatattattatcggttgggcagtagtgacctttgatttagccttg
ttgttcaaacgctgtgttttacatcaaattccattattaattggtagaggacataccgaa
ctgagctggaaagttgccgataaatataggcctgaaacactctctttacctgggcgcgtg
gtgttggatggtattgattggcttaaagcggcattttatcagtttgatagtttttcgtta
gagtctgtatcacggcaattattatctgaaggtaaagccattgatcatgtagaaaatcgt
ggccaagaaattacccatttatttgaacaagataaaaatgcattggctttttataatatt
acagactgccggctagtgtgggatatttttgaaaaaacacagttgttagattttgctatt
gaacgcgctaagttaacgggtttggagtttggccgagtgggtgcatcgattgcggcattt
tatcatttgtatctgcctcacttacatcgaagtggttttgtagcacctgcacaacccgct
agccaaggcttagaaagccctggtggatatgttatgtcttctataccaggttattataaa
gatgttttagtattagattttaaaagtctatatccgtcgattattagaacattccttatc
gatcctaaaggcttagttgaggggctttacgctagggaagtaaaaggtgatgcaacgaca
gtggctggatatttaggtgctcaatttagtcgaaaatcacctattttgcctgcattagtt
gccagccttgcagagcaaagagaactggccaaacgagatagaaatgcgccgttatcacaa
gcgataaaaattattatgaactcattgtatggcgtactaggctcaagaggttgtgtattt
catgatgctaagttagccagttcgattaccatgcgcggtcatcaaattatgaaactcaca
aagcaatggatagaagagtgcggttatcaagtgatttacggtgataccgactctaccttt
gtctggttaggggataatcatgggattaaagatatccaagcggttggtaaacacctatca
gtatcaataacccaacgttggcttgaatggtgtgtagaagaatatcaattagacagttat
cttgagttggaatttgaaacccactttgaacaatttattatgcctaccttaaggggctca
gatgaaggcagtaaaaagcgttatgtcggcgcggtgtcaaatgatcagcaacaattaact
ctgacttttaaaggtatggagcaggtgagaagtgattggagccctattgcaagaaggatg
cagtaccatttatatgaattatttttcaagggcgaggatgtcattgattttttgagtaat
gagcttgcggcaattaagtgtggtgctcgagacaatgaacttatctttaaaaagcgatta
agacgcaatgttgaagattataccgcaaagtcgtcaccccatgttaaagccgcgaaacag
cttgccgaactactcggagacgtaagcgttacccgtaagggacaacagatacgatatata
atgacgctcactggtgcacaaaccatagaagcaaaaccacaaaatattgattatgaatac
tatatttgtaaacaaatcaaacccatagctgagcccattctacaactgtgtggtcatagc
tttgactcactagtaaataatcaactcctattgctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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