KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_2936
Entry
SFyv_2936         CDS       T03315                                 
Name
(GenBank) Dcm
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00270  Cysteine and methionine metabolism
sfs01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    SFyv_2936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sfs03000]
    SFyv_2936
   03032 DNA replication proteins [BR:sfs03032]
    SFyv_2936
   03036 Chromosome and associated proteins [BR:sfs03036]
    SFyv_2936
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfs02048]
    SFyv_2936
Enzymes [BR:sfs01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     SFyv_2936
Transcription factors [BR:sfs03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    SFyv_2936
DNA replication proteins [BR:sfs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    SFyv_2936
Chromosome and associated proteins [BR:sfs03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SFyv_2936
Prokaryotic defense system [BR:sfs02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    SFyv_2936
SSDB
Motif
Pfam: DNA_methylase DNA_meth_N
Other DBs
NCBI-ProteinID: AIL41133
Position
complement(2070133..2071551)
AA seq 472 aa
MQENISVTDSYSTGNAAQAMLEKLLQIYDVKMLVAQLNGVGENHWSAAILKRALANDSAW
HRLSEKEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA
VRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF
SLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDKGKTFRI
IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS
ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVT
RTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAK
FRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgcaggaaaatatatcagtaaccgattcatacagcaccgggaatgccgcacaggcaatg
ctggagaaactgctgcaaatttatgatgttaaaatgctggtggcgcagcttaatggtgtg
ggtgagaatcactggagcgcggcaattttaaaacgtgcgctggcgaatgactcggcatgg
caccgtttaagtgagaaagagtttgcccatctgcaaacgttgttacccaaaccaccggaa
catcatccgcattatgcgtttcgctttatcgatctatttgccggaattggcggcatccgt
cgtggttttgaatcgattggtggacagtgcgtgtttaccagcgaatggaacaaacatgcg
gtacgcacttataaagccaaccattattgcgacccggcgacgcatcattttaatgaagat
atccgcgacatcaccctcagtcatcaagaaggcgtgagtgatgaggcggcggcggaacat
attcgtcaacacattcctgaacacgatgttttactggccggtttcccttgtcagccattt
tcgctggctggcgtatcgaaaaagaactcgctcgggcgggcgcacggttttgcctgcgat
acccagggcacgctgttctttgatgtggtgcgcattatcgacgcgcgtcgtccggcgatg
tttgtgctcgaaaacgtcaaaaacctgaagagtcacgataagggaaaaacgttccgcatc
atcatgcagacgctggacgaactgggctatgacgttgccgatgcagaagataacgggccg
gacgatccgaaaatcatcgatggtaaacatttcctgccgcagcaccgtgaacgcatcgtg
ctggtgggttttcgtcgcgatctgaatctgaaagccgattttactctgcgtgatatcagc
gaatgtttccctgcacagcgagtgacgctggcgcagctgctggacccgatggttgaggcg
aaatatatcctgacgccggtgctgtggaagtacctctatcgatatgcgaaaaaacatcag
gcgcgcggtaacggcttcggttatggaatggtttatccgaacaatccgcaaagcgtcacc
cgtacgctgtctgctcgttattacaaagatggcgcggaaattttaatcgatcgcggttgg
gatatggccacgggtgagaaagactttgacgatccgctgaatcagcaacatcgtccacgt
cggttaacgcctcgtgaatgcgcgcgcttaatgggttttgaagcgccgggagaagcgaaa
ttccgcattccggtttcggacactcaggcctatcgccagttcggcaactcggtggtcgtg
ccggtctttgccgcggtggcaaaactgcttgagccaaaaatcaaacaggcggtggcgttg
cgtcagcaagaggcacaacatggtcgacgttcacgataa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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