KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3263
Entry
SFyv_3263         CDS       T03315                                 
Name
(GenBank) putative endonuclease 4
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SFyv_3263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfs03400]
    SFyv_3263
Enzymes [BR:sfs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     SFyv_3263
DNA repair and recombination proteins [BR:sfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     SFyv_3263
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AIL41390
Position
2300518..2301375
AA seq 285 aa
MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH
YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE
DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG
HDAFRWIMQNDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaaatacattggagcgcacgttagtgctgctggcggtctggcaaatgccgcaattcgc
gccgccgaaatcgacgcaaccgcgtttgccttgttcaccaaaaaccaacgtcagtggcgt
gccgcaccgctcacgacgcaaaccatcgatgaattcaaagccgcctgtgaaaaatatcac
tacacatcggcgcaaattcttccccacgacagttatctgatcaacctcggacatccggtc
actgaagctctggaaaaatcgcgcgatgcctttatagatgaaatgcagcgttgcgaacaa
ctggggctttctttgctcaacttccaccctggcagccatctgatgcagatttcagaagag
gattgccttgcgcgtattgccgaatccatcaacattgcgctggataaaactcaaggtgta
acagcggtgattgaaaacaccgccggtcagggcagtaacttagggtttaaattcgaacat
ctcgcggcgattatcgacggcgtggaagataaatcccgcgtcggcgtctgcattgatacc
tgccatgctttcgctgccgggtatgatttgcgtactccagccgaatgcgaaaaaacgttc
gctgattttgcccgtattgtcggctttaagtatttgcgcgggatgcaccttaacgatgcg
aaaagtacctttggcagccgcgttgaccgccatcatagcctcggtgaaggcaatatcggt
catgatgcgttccgctggattatgcagaacgaccgtttcgacggcattccgctgatcctt
gaaaccatcaacccggatatctgggcagaagagatcgcctggctgaaagcgcaacaaact
gaaaaagcggtagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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