KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4010
Entry
SFyv_4010         CDS       T03315                                 
Name
(GenBank) RNA polymerase sigma factor rpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfs03021]
    SFyv_4010
Transcription machinery [BR:sfs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SFyv_4010
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AIL41971
Position
complement(2864367..2865359)
AA seq 330 aa
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRK
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagtcagaatacgctgaaagttcatgatttaaatgaagatgcggaatttgatgagaac
ggagttgaggtttttgacgaaaaggccttagtagaagaggaacccagtgataacgatttg
gccgaagaggaactgttatcgcagggagccacacagcgtgtgttggacgcgactcagctt
taccttggtgagattggttattcaccactgttaacggccgaagaagaagtttattttgcg
cgtcgcgcactgcgtggagatgtcgcctctcgccgccggatgatcgagagtaacttgcgt
ctggtggtaaaaattgcccgccgttatggcaatcgtggtctggcgttgctggaccttatc
gaagagggcaacttggggctgatccgcgcggtagagaagtttgacccggaacgtggtttc
cgcttctcaacatacgcaacctggtggattcgccagacgattgaacgggcgattatgaac
caaacccgtactattcgtttgccgattcacatcgtaaaggagctgaacgtttacctgcga
accgcacgtgagttgtcccataagctggaccatgaaccaagtgcggaagagatcgcagag
caactggataagccagttgatgacgtcagccgtatgcttcgtcttaacgagcgcattacc
tcggtagacaccccgctgggtggtgattccgaaaaagcgttgctggacatcctggccgat
gaaaaagagaacggtccggaagataccacgcaagatgacgatatgaagcagagcatcgtc
aaatggctgttcgagctgaacgccaaacagcgtgaagtactggcacgtcgattcggtttg
ctggggtatgaagcggcaacactggaagatgtaggtcgtgaaattggcctcacccgtgaa
cgtgttcgccagattcaggttgaaggcctgcgccgtttgcgcgaaatcctgcaaacgcag
gggctgaatatcgaagcgctgttccgcaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system