KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4928
Entry
SFyv_4928         CDS       T03315                                 
Name
(GenBank) penicillin-binding protein 1A
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00550  Peptidoglycan biosynthesis
sfs01100  Metabolic pathways
sfs01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SFyv_4928
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SFyv_4928
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sfs01003]
    SFyv_4928
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sfs01011]
    SFyv_4928
Enzymes [BR:sfs01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     SFyv_4928
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     SFyv_4928
Glycosyltransferases [BR:sfs01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   SFyv_4928
Peptidoglycan biosynthesis and degradation proteins [BR:sfs01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   SFyv_4928
SSDB
Motif
Pfam: Transgly PCB_OB Transpeptidase DUF3502
Other DBs
NCBI-ProteinID: AIL42661
Position
3516272..3518803
AA seq 843 aa
MILAVCCILLGAGSIYGLYRYIEPQLPDVVTLKDVRLQIPMQIYSADGELIAQYGEKRRI
PVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGASTITQQLAR
NFFLSPERTMMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAAQVYFGKT
VDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQQQFDQTRTEA
INANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYEDGYRIYTTITRKVQQAAQQAVRNNV
LDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQGATAMLA
DGSTVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNS
ALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLN
DVPISRWDAGAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQR
FGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAK
PKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGA
QEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAW
FSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEG
VPEQPLTPPPGIVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQ
ELF
NT seq 2532 nt   +upstreamnt  +downstreamnt
ttgatccttgcagtctgttgcattctgctgggagcaggctcgatttatggcctataccgc
tacatcgagccacaactgccggatgtggtgacattaaaagatgttcgcctgcaaattccg
atgcagatttacagcgccgatggcgagctgattgctcaatacggtgagaaacgtcgtatt
ccggttacgttggatcaaatcccaccggagatggtgaaagcctttatcgcgacggaagac
agccgcttctacgagcatcacggcgttgacccggtggggatcttccgtgcggcaagtgtg
gcgctgttctccggccacgcgtcacaaggggcgagtaccattacccagcagctggcgaga
aatttcttcctcagtccagaacgcacgatgatgcgtaagattaaggaagtcttcctcgcg
attcgcattgaacagttgctgacgaaagacgaaatcctcgagctttatctgaacaagatt
taccttggttaccgcgcctatggtgtcggtgctgcggcacaagtctatttcggtaaaacg
gtcgaccaactgacgctgaacgaaatggcggtgatagccgggttgccgaaagcgccttcc
acctttaatccgctctactcaatggatcgtgccgtcgcgcggcgtaacgtcgtactgtcg
cggatgctggatgaagggtatatcacccagcaacagttcgatcagacacgcactgaggcg
attaacgctaattatcacgcgccggagattgctttctctgcgccgtacctgagcgaaatg
gtgcgccaggagatgtataaccgttatggcgaaagtgcctatgaagacggttatcgcatt
tacaccaccatcacccgcaaagtgcagcaggccgcgcagcaggcggtacgtaataacgtg
ctggactacgacatgcgccacggctatcgcggcccggcaaatgtgctgtggaaagtgggc
gagtcggcgtgggataacaacaagattaccgatacgctgaaggcgctgccgacctatggt
ccgctgctgcctgccgcagtcaccagcgccaatcctcagggagcgacggcgatgctggcg
gacgggtcgaccgtcgcattgagtatggaaggcgttcgctgggcgcgtccttaccgttcg
gatactcagcagggaccgacgccgcgtaaagtgaccgatgttctgcaaacgggtcagcaa
atctgggttcgtcaggttggcgatgcatggtggctggcacaagtgccggaagtgaactcg
gcgctggtgtcgatcaatccgcaaaatggtgccgttatggcgctggtcggtggctttgat
ttcaatcagagcaagtttaaccgcgccacccaggcactgcgtcaggtgggttccaacatc
aaaccgttcctctacaccgcggcgatggataaaggtctgacgctggcaagtatgttgaac
gatgtgccaatttctcgctgggatgcaggtgccggttctgactggcagccgaagaactca
ccaccgcagtatgctggtccaattcgcttacgtcaggggctgggtcagtcgaaaaacgtg
gtgatggtacgtgcaatgcgggcgatgggcgtcgactacgctgcagaatatctgcaacgc
ttcggcttcccggcgcaaaacattgtccacaccgaatcgctggcgctgggttcagcgtcc
ttcaccccaatgcaggtggcgcgcggctacgcggtcatggcgaacggcggcttcctagtg
gacccgtggtttatcagcaaaattgaaaacgatcagggcggcgtgattttcgaagcgaaa
ccgaaagtagcctgcccggaatgcgatattccagtgatttacggtgatacgcagaaatcg
aacgtgctggaaaataacgatgttgaagatgtcgctatctcccgcgagcagcagaatgtt
tctgtaccaatgccgcagctggagcaggcaaatcaggcgttagtggcgaagactggcgcg
caggagtacgcaccgcacgtcatcaacactccgctggcattcctgattaagagtgctttg
aacaccaatatctttggtgaaccaggctggcagggtaccggctggcgtgcaggtcgtgat
ttgcagcgtcgcgatatcggcgggaaaaccggtaccactaacagttcgaaagatgcgtgg
ttctcgggttacggtccgggcgttgtgacctcggtctggattggctttgatgatcaccgt
cgtaatctcggtcatacaacggcttccggagcgattaaagatcagatctcaggttacgaa
ggcggtgccaagagtgcccagcctgcatgggacgcttatatgaaagccgttcttgaaggt
gtgccggagcagccgctgacgccgcctccgggtattgtgacggtgaatatcgatcgcagc
accgggcagttagctaatggtggcaacagccgcgaagagtatttcatcgaaggtacgcag
ccgacacaacaggcggtgcacgaggtgggaacgaccattatcgataatggtgaggcacag
gaattgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system