KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_6332
Entry
SFyv_6332         CDS       T03315                                 
Name
(GenBank) hypothetical protein
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfs02048]
    SFyv_6332
Enzymes [BR:sfs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SFyv_6332
Prokaryotic defense system [BR:sfs02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SFyv_6332
SSDB
Motif
Pfam: Methylase_S
Other DBs
NCBI-ProteinID: AIL43697
Position
complement(4548359..4550020)
AA seq 553 aa
MSVEKLIVDHMETWTSALQTRSTAGRGSSGKIDLYGIKKLRELILELAVRGKLVPQDPND
EPASDLLKRIAAEKAELVKQGKIKKQKPLPEISEEEKPFELPEGWEWVHLPDIYCSISES
SRKIKSSEILPEGKYPVIEQSQEFISGYCNNECLLIKLNNPVIVFGDHTRNIKFIDFDFV
VGADGVKILSPILICERFFFWQLRSFKLDVRGYARHFKVLNSCLFALPPIAEQERIVEKV
SSLMSLCDQLEQQSLTSLDAHQQLVETLLGTLTDSQNTAELAENWARISEHFDTLFTTEA
SVDALKQTILQLAVMGKLVPQDPNDEPASELLKRIAQEKAQLVKEGKIKKQKPLPPISDE
EKPFELPEGWEWCRIGNIVNIKSELVSPKDYLNLYQVAPDIIEKGTGRVISKRTVKESGV
KGPNSRFYKGQIVYSKIRPSLSKVFLAEYNGLCSADMYPLDCYINPNYLLKYILSIPFLM
QVKKAENRIKMPKLNSDSFYNIIVAIPPYNEQQAIFDKINSIEAVCNGLISYIGIYHKTQ
LHLADALTDAAIN
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgagtgtggaaaagctgatcgttgatcatatggaaacctggacctcggcgttgcaaacc
cgttccaccgccgggcgcggcagctccggtaagattgatttgtatggtattaagaaattg
cgtgagctgattctggaactggcggtgcgcggtaaactggtgccgcaggatccgaatgat
gaaccggcgtcggacctgctgaagcgtattgcggcggaaaaagcagagctggtgaagcaa
ggcaaaattaaaaagcaaaaaccactgccagaaattagtgaggaagagaagccgtttgaa
ttgccggagggatgggagtgggtgcacctccctgatatttattgctcaatttctgagtca
tctagaaaaataaaatcctccgaaatactacctgagggaaaatatcctgttatcgagcaa
agccaagaatttatttctggttattgcaacaatgaatgtctgttaataaagttaaataat
ccagttatagtttttggtgatcacacaaggaatattaaatttattgattttgattttgtt
gtcggcgctgacggtgtgaagattttatcacctatattaatttgtgagcgtttctttttt
tggcagttacgatcatttaaattagatgtaagaggatacgcgagacattttaaagtatta
aatagctgcttatttgcattaccccccattgcagaacaagagcgaatagttgaaaaagtt
agctctttgatgtccctctgcgaccaactagaacagcaatccctgaccagtctggacgca
catcagcaactggttgaaaccctgttgggaacgcttacagacagccaaaacaccgcggaa
ctggctgaaaactgggcgcgtattagcgagcatttcgacaccctatttaccaccgaagcc
agcgtggatgcgttaaaacagaccattctgcaactggccgtaatgggcaaacttgtgccg
caggatccgaatgacgaacccgcctctgaactgctcaaacgtattgcgcaggaaaaagct
caattggtgaaagaagggaaaataaaaaaacaaaaaccactgccgccaattagcgatgag
gaaaaaccgtttgaacttccggaagggtgggaatggtgtcgtattggtaatatagttaat
attaaatctgaattagtatcaccaaaagattatttaaatttatatcaagtagcacctgat
attattgaaaagggcactgggagagtgatatcaaagagaacagtgaaagaatcaggagtc
aaagggccaaatagtcgcttttataaaggacaaattgtttattctaaaatccgcccgtca
ttatccaaagtttttttagcagagtataatggtctttgcagtgctgatatgtatccatta
gactgttacattaatccaaattacttattgaaatatatcctttccattccatttcttatg
caagtcaaaaaagcagagaacagaataaaaatgccaaaacttaattctgacagtttttac
aatattattgttgcgattcccccctataatgaacaacaagcaatatttgataagataaat
tctattgaagcagtatgcaatggtcttatttcttatattgggatttatcataaaacccaa
ctgcatcttgcagacgcactcactgacgcagcgataaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system