KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_00086
Entry
NCTC1_00086       CDS       T03751                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase,UDP-N-acetylmuramoylalanine--D-glutamate ligase,UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase,Folylpolyglutamate synthase,UDP-N-acetylmuramoylalanine--D-glutamate ligase,Mur ligase middle domain
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00470  D-Amino acid metabolism
sft00550  Peptidoglycan biosynthesis
sft01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sft00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCTC1_00086 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NCTC1_00086 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sft01011]
    NCTC1_00086 (murD)
Enzymes [BR:sft01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     NCTC1_00086 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:sft01011]
 Precursor biosynthesis
  Amino acid ligase
   NCTC1_00086 (murD)
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M Mur_ligase_C NAD_binding_7
Other DBs
NCBI-ProteinID: CDX05381
UniProt: Q83MF9
Position
1:95192..96508
AA seq 438 aa
MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLND
EWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNV
TEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL
NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALVALALADAAGLPRASSLKALTTFTGL
PHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLVRYL
NGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQF
KNFEQRGNEFARLAKELG
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggctgattaccagggtaaaaatgttgtcattatcggcctgggcctcaccgggctttcc
tgcgtggactttttcctcgctcgcggtgtgacgccgcgcgttatggatacgcgtatgaca
ccgcctggcctggataaattacccgaagccgtagaacgccacacgggcagtctgaatgat
gaatggctgatggcggcagatctgattgtcgccagtcccggtattgcactggcgcatcca
tccttaagcgctgccgctgatgccggaatcgaaatcgttggcgatatcgagctgttttgt
cgcgaagcacaagcaccgattgtggcgattaccggttctaacggcaaaagcacggtcacc
acgctagtgggtgaaatggcgaaagcggcgggggttaacgttggtgtgggtggcaatatt
ggcctgcctgcgttgatgctactggatgatgagtgtgaactgtacgtgctggaactgtcg
agcttccagctggaaaccacctccagcttacaggcggtagcagcgaccattctgaacgtg
actgaagatcatatggatcgctacccgtttggtttacaacagtatcgtgcagcaaaactg
cgcatttacgaaaacgcgaaagtttgcgtggttaatgctgatgatgccttaacaatgccg
attcgcggtgcggatgaacgctgcgtcagctttggcgtcaacatgggtgactatcacctg
aatcatcagcagggcgaaacctggctgcgggttaaaggcgagaaagtgctgaatgtgaaa
gagatgaaactttccgggcagcataactacaccaatgcgctggtggcgctggcgctggca
gatgccgcagggttaccgcgcgccagcagcctgaaagcgttaaccaccttcaccggtctg
ccgcatcgctttgaagtggtgctggagcataacggtgtgcgctggattaacgattcaaaa
gcgaccaacgtcggcagtacggaagcggcgctgaatggcctgcacgtagacggcacgctg
catttgttgctgggcggcgatggtaaatcggcggactttagcccactggtgcgttacctg
aatggcgataacgtacgtctgtattgtttcggtcgtgacggcgcgcagctggcggcgcta
cgcccggaagtggcagaacaaaccgaaactatggaacaggctatgcgcttgctggctccg
cgtgttcagccgggcgatatggttctgctctccccggcctgtgccagccttgatcagttc
aagaactttgaacaacgaggcaatgagtttgcccgtctggcgaaggagttaggttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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