KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_01006
Entry
NCTC1_01006       CDS       T03751                                 
Symbol
yccW
Name
(GenBank) putative SAM-dependent methyltransferase,Ribosomal RNA large subunit methyltransferase I,23S rRNA m(5)C1962 methyltransferase,Uncharacterized conserved protein,RNA methyltransferase, RsmD family,S-adenosylmethionine-dependent methyltransferase
  KO
K06969  23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:sft00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sft03009]
    NCTC1_01006 (yccW)
Enzymes [BR:sft01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     NCTC1_01006 (yccW)
Ribosome biogenesis [BR:sft03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    NCTC1_01006 (yccW)
SSDB
Motif
Pfam: Methyltrans_SAM PUA_3 Cons_hypoth95 Methyltransf_31 MTS Methyltransf_25 Met_10 Methyltransf_15 PrmA Methyltransf_11 TRM PUA Methyltransf_12 Spermine_synth Methyltransf_10 Methyltr_RsmB-F
Other DBs
NCBI-ProteinID: CDX06254
UniProt: A0A1W2MH50
Position
1:complement(976214..977404)
AA seq 396 aa
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ
IRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRF
GNFLVLQLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGLVTGELPP
ALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALM
GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD
PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDA
GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgagtgtacgtttagtgttagccaaagggcgcgaaaaatcattacttcgtcgccatccg
tgggtcttttccggggccgttgcccgcatggaaggtaaagccagcctcggtgaaaccatc
gatattgttgatcatcagggaaaatggttagcacgcggcgcttattcgccagcttcgcaa
atccgggcgcgcgtctggacgtttgacccgtctgagtctatcgacattgcttttttttcc
cgccgtttgcaacaagcacaaaaatggcgtgactggctggcgcaaaaagatggcctcgac
agctatcgtttaatcgccggagaatctgatggcctgccgggtattactatcgatcgtttc
ggtaattttctggtgctgcaactgctgagtgctggcgcagaatatcagcgcgcggcatta
attagtgccctgcaaacgctgtacccggaatgtgcgatttacgatcgcagcgatgttgcg
gtacgtaaaaaagaagggatggagctgacccagggcctcgtcaccggcgagttgccgcct
gccctgctgccgattgaagaacacggcatgaagctgctggtggatattcagcacggacac
aaaacgggctactatctggaccagcgagacagccgcctggctacccgccgctacgttgaa
aataaacgtgtgctgaactgtttctcctataccggtggtttcgccgtatcggcactgatg
ggcggttgcagccaggttgtcagcgttgatacctcccaggaagcgctggatattgcacgg
cagaacgttgagctgaacaaactggatctgagcaaggctgagtttgtccgtgatgatgtc
tttaaattgctgcgtacttatcgcgatcgcggtgaaaaatttgacgttatcgtgatggac
ccgccgaagtttgttgagaataaaagccagttgatgggcgcgtgtcgtggttataaagac
atcaacatgctggcgattcagttgctgaatgaaggcggtattctcctgactttctcctgt
tccggtctgatgaccagcgatttatttcagaaaatcatcgcggatgccgcaattgatgcc
ggtcgtgatgtacaatttatagagcagttccgtcaggcagccgatcatccggtgatcgct
acctacccggaagggctatatctgaaagggtttgcctgtcgcgtcatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

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