KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_02031
Entry
NCTC1_02031       CDS       T03751                                 
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase,Aspartate--tRNA ligase,aspartyl-tRNA synthetase,Aspartyl/asparaginyl-tRNA synthetases,aspartate--tRNA ligase,tRNA synthetases class II (D, K and N)
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sft00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    NCTC1_02031 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sft01007]
    NCTC1_02031 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sft03016]
    NCTC1_02031 (aspS)
   03029 Mitochondrial biogenesis [BR:sft03029]
    NCTC1_02031 (aspS)
Enzymes [BR:sft01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     NCTC1_02031 (aspS)
Amino acid related enzymes [BR:sft01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   NCTC1_02031 (aspS)
Transfer RNA biogenesis [BR:sft03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    NCTC1_02031 (aspS)
 Prokaryotic type
   Other AARSs
    NCTC1_02031 (aspS)
Mitochondrial biogenesis [BR:sft03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    NCTC1_02031 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: CDX07233
UniProt: Q7UAE6
Position
1:complement(1871127..1872899)
AA seq 590 aa
MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA
SELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLDSNHVNTEEA
RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
APQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLK
SVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKG
LEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLT
DESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVING
YEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM
LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAENN
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgcgtacagaatattgtggacagctccgtttgtcccacgtggggcagcaggtgactctg
tgtggttgggtcaaccgtcgtcgtgatcttggtagcctgatcttcatcgatatgcgcgac
cgcgaaggtatcgtgcaggtatttttcgatccggatcgtgcggacgcgttaaagctggcc
tctgaactgcgtaatgagttctgcattcaggttacgggcaccgtacgtgcgcgtgacgaa
aaaaatattaaccgcgatatggcgaccggcgaaattgaagtgctggcgtcctcgctgact
atcatcaaccgcgcagatgttctgccgcttgactctaaccacgtcaacaccgaagaagcg
cgtctgaaataccgctacctcgacctgcgtcgcccggaaatggcgcagcgcctgaaaacc
cgcgctaaaatcaccagcctggtgcgccgttttatggatgaccacggcttcctcgacatc
gaaactccgatgctgaccaaagccacgccggaaggcgcgcgtgactacctggtgccttct
cgtgtgcacaaaggtaaattctacgcactgccgcaatccccacagttgttcaaacagctg
ctgatgatgtccggttttgaccgttactatcagatcgttaaatgcttccgtgacgaagac
ctgcgcgctgatcgtcagcctgaatttactcagatcgatgtggaaacttctttcatgacc
gcgccgcaagtgcgtgaagtgatggaagcgctggtgcgtcatttgtggctggaagtgaag
ggcgtggatctgggcgatttcccggtaatgacctttgcggaagcagaacgccgttatggt
tctgataaaccggatctgcgtaacccgatggaactgaccgacgttgccgatctgctgaaa
tctgttgagtttgcagtatttgcggggccggcgaacgatccgaaaggccgtgttgccgct
ctacgtgttccgggtggcgcatcgctgacccgtaagcagatcgacgaatacggtaacttc
gttaaaatctacggcgcgaaaggtctggcttacatcaaagttaacgaacgcgcgaaaggt
ctggaaggtatcaacagcccggtagcgaagttccttaatgcagaaatcatcgaagccatc
ctggatcgtactgccgcgcaagatggcgatatgattttcttcggtgccgacaacaagaaa
attgttgccgacgggatgggcgcactgctcctgaaagtgggtaaagaccttggtctgacc
gacgaaagcaaatgggcaccgctgtgggttatcgacttcccgatgtttgaagacgacggt
gaaggcggcctgacggcaatgcaccatccgttcacctcaccgaaagatatgactgctgca
gaactgaaagctgcaccggaaaatgcggtggcgaacgcttacgatatggtcatcaatggt
tacgaagtgggcggtggttcagtacgtatccataatggtgatatgcagcagacggtgttt
ggtattctgggtatcaacgaagaggaacagcgcgagaaattcggcttcctgctcgacgcc
ctgaaatacggtactccgccgcacgcaggtctggcattcggtcttgaccgtctgaccatg
ctgctgactggcaccgacaatatccgtgacgttatcgccttcccgaaaaccacggcggca
gcgtgtctgatgactgaagcaccgagctttgctaacccgactgcactggctgagctgagc
attcaggttgtgaagaaggctgagaataactga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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