KEGG T03751: NCTC1

Shigella flexneri NCTC1 (serotype 2a): NCTC1_02635

Entry

NCTC1_02635       CDS       T03751

Symbol

mnmC

Name

(GenBank) peptidase,tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC,bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase,Uncharacterized conserved protein,tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain,Protein of unknown function (DUF752)

K15461

tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]

Organism

sft Shigella flexneri NCTC1 (serotype 2a)

Brite

KEGG Orthology (KO) [BR:sft00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sft03016]
    NCTC1_02635 (mnmC)
Enzymes [BR:sft01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     NCTC1_02635 (mnmC)
Transfer RNA biogenesis [BR:sft03016]
Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    NCTC1_02635 (mnmC)

SSDB

Motif

Pfam:

DAO Methyltransf_30 NAD_binding_8 ThiI

Other DBs

NCBI-ProteinID:

CDX07803

Position

1:2413004..2415010

AA seq 668 aa
MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLF
VIAESGFGTGLNFLTLWKAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL
APWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF
APAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREML
CGVMEQTLPLPCSTPWFNRTGSSKREVAIIGGGIASALLSLALLRRGWQVALYCADEAPA
LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKS
QHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ
QQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVA
GQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ
RLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEA
VSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLL
KGKAVKAG

NT seq 2007 nt +upstreamnt +downstreamnt
gtgaaacactactccatacaacctgccaacctcgaatttaatgctgagggtacacctgtt
tcccgagattttgacgatgtctatttttccaacgataacgggctggaagagacgcgttat
gtttttctgggaggtaaccaattagaggtacgctttcctgagcatccacatcctctgttt
gtgatagcagagagcggcttcggcaccggattaaacttcctgacgctatggaaggcattt
gatcagtttcgcgaagcgcatccgcaagcgcaattacaacgcttacatttcattagtttt
gagaaatttcccctcacccgtgcggatttagccttagcgcatcaacactggccggaactg
gctccgtgggcagaacaacttcaggcgcagtggccaatgcccttgcccggttgccatcgt
ttattgctcgatgaaggccgcgtgacgctggatttatggtttggcgatattaacgaactg
accagccaactggacgattcgctaaatcaaaaagtagatgcctggtttctggacggcttt
gcgccagctaaaaacccggatatgtggacgcaaaatctgtttaacgccatggcaaggttg
gcgcgtccaggcggcacgctggcgacatttacgtctgccggttttgtccgccgcggtttg
caggaagccggattcacgatgcaaaaacgtaagggctttgggcgcaaacgggaaatgctt
tgtggggtgatggaacagacattaccactcccctgctccacgccgtggtttaatcgtacg
ggcagcagcaaacgggaagtagcgattatcggcggtggtattgccagcgcgttgttgtcg
ctggcgttattacggcgcggctggcaggtagcgctttattgcgcggatgaagcccccgcg
ctgggtgcttccggcaatcgccagggggcgctgtatccgttattaagcaaacacgatgag
gcgctaaaccgctttttctctaatgcgtttacttttgctcgtcggttttacgaccaatta
cccgttaaatttgatcatgactggtgcggcgtcacgcagttaggctgggatgagaaaagc
cagcataaaatcgcacagatgttgtcaatggatttacccgcagaactggctgtagccgtt
gaggcaaatgcggttgaacaaattacgggcgttgcgacaaattgcagcggcattacttat
ccgcaaggtggttggctgtgcccagcagaactgacccgtaatgtgctggaactggcgcaa
cagcagggtttgcagatttattatcaatatcagttacagaatttatcccgtaaggatgac
tgttggttgttgaattttgcaggagatcagcaagcaacacacagcgtagtggtactggcg
aacgggcatcaaatcagccgtttcagccaaacgtcgactctcccggtgtattcggttgcc
gggcaggtcagccatattccgacaacgccggaactggcagagctgaagcaggtgctgtgc
tatgacggttatctcacgccacaaaatccggcgaatcaacatcattgtattggtgccagt
tatcatcgcggcagcgaagatacggcgtacagtgaggacgatcagcagcagaatcgccag
cggttgattgattgtttcccgcaggcacagtgggcaaaagaggttgatgtcagtgataaa
gaggcgcgctgcggtgtgcgttgtgccacccgcgatcatctgccaatggtaggcaatgtt
cccgattatgaggcaacactcgtggaatatgcgtcgttggcggagcaaaaagatgaggcg
gtaagcgcgccggtttttgacgatctctttatgtttgcggctttaggttctcgcggtttg
tgttctgccccgctgtgtgccgagattctggcggcgcagatgagcgacgaaccgattccg
atggatgccagtacgctggcggcgttaaacccgaatcggttatgggtgcggaaattgttg
aagggtaaagcggttaaggcggggtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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