KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_02860
Entry
NCTC1_02860       CDS       T03751                                 
Symbol
qseF_2
Name
(GenBank) sigma-54 dependent response regulator,Quorum-sensing regulator protein F,response regulator GlrR,Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains,nitrogen regulation protein NR(I),Sigma-54 interaction domain
  KO
K07715  two-component system, NtrC family, response regulator GlrR
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft02020  Two-component system
sft02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sft00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NCTC1_02860 (qseF_2)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NCTC1_02860 (qseF_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sft02022]
    NCTC1_02860 (qseF_2)
Two-component system [BR:sft02022]
 NtrC family
  GlrK-GlrR (amino sugar metabolism)
   NCTC1_02860 (qseF_2)
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA AAA_2 HTH_8 Glycos_transf_1 AAA_16 AAA_3 FAD_binding_2 AAA_7
Other DBs
NCBI-ProteinID: CDX08018
UniProt: A0A658Y9I4
Position
1:complement(2634062..2635396)
AA seq 444 aa
MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMD
EMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDA
LEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNA
SPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM
PAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLSKAMARGEFREDLYYRLNVV
SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVI
EQCVALTSSPVISDALVEQALEGENTALPTFVEARNHFELNYLRKLLQITKGNVTHAARM
AGRNRTEFYKLLSRHELDANDFKE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagccataaacctgcgcatttattattggtcgatgacgatccgggattgctgaaactg
cttggcctgcgcctgaccagcgaaggctacagtgtggtcacggcggaaagtggcgctgaa
ggattacgggtactgaatcgcgaaaaagtagatttagttatcagcgacctgcggatggat
gaaatggacggtatgcagctatttgctgaaatccagaaagtgcagccgggaatgccagta
attattcttactgcgcatggttctatccccgatgccgttgctgcaacacagcagggcgtt
tttagtttcctcaccaagcctgtcgataaagatgcgctatatcaggcaattgacgatgcg
ctggagcaatccgcgccagccaccgatgaacgctggcgcgaggcaattgtcacccgcagc
ccgctgatgctgcgtttgctggaacaggcgcggctggtggcgcaatcagacgtcagcgtt
ttgattaacggtcagagcggcaccgggaaagagattttcgcccaggctatccacaacgcc
agcccgcgcaacagcaaaccatttattgctattaactgtggcgcattgcccgagcaattg
ctggagtcggagctgtttggtcatgcgcgtggcgcgtttactggcgctgtcagcaatcgc
gaaggtttattccaggcggcggaaggcggaacgctatttctcgatgaaattggcgatatg
cctgcgccgttacaggtcaaactgctgcgcgtgttgcaggagcgtaaagtgcgcccgctg
ggcagtaaccgcgatattgatatcaatgtgcggattatttctgccactcaccgtgatctg
tcaaaagcgatggcgcgcggggaattccgcgaagatctctattaccgcctcaacgttgtc
agcctgaaaattccggcactggcggagcgcacagaagacattccgctactggcaaatcac
ctgttgcgccaggcggcagagcgacataaaccgtttgtccgcgcgttctctaccgatgcg
atgaaacgcctgatgaccgcgagctggccgggtaatgtgcgccagttggtcaacgtgatt
gaacagtgcgtggcgctgacctcatctccggtgattagtgatgcgctggtggagcaggcg
ctggagggtgaaaatacggcgctgccaacctttgttgaggcacgtaatcattttgaactc
aactacttgcgtaagctgctgcaaatcaccaaaggcaacgtcacccacgcggcgagaatg
gcggggcgcaaccggacagaattttataaactgctttcccgacacgagctggatgcaaac
gatttcaaggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system