KEGG   Syntrophobacter fumaroxidans: Sfum_0993
Entry
Sfum_0993         CDS       T00418                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
sfu  Syntrophobacter fumaroxidans
Pathway
sfu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Sfum_0993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfu03400]
    Sfum_0993
Enzymes [BR:sfu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sfum_0993
DNA repair and recombination proteins [BR:sfu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Sfum_0993
    RecFOR pathway proteins
     Sfum_0993
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_3 DUF815 AAA_14 AAA_16 NB-ARC TsaE nSTAND3 RNA_helicase
Other DBs
NCBI-ProteinID: ABK16688
UniProt: A0LGY6
Position
complement(1218119..1219138)
AA seq 339 aa
MTERIVEPKPHEDDLPVENSLRPRRLDEYVGQQTVKENLAVFIEAARQRAEPLDHVLFHG
FPGLGKTSLATVISNELGVNMRSTSGPVIERAGDLAAILTNLEQGDVLFIDEIHRLNHVV
EEILYPAMEDFQLDIIIGQGPSARTIKLDLPPFTLVGATTRAGLLSPPLRDRFGVTLRLE
FYKVDELKLIVTRSARILGIRVDAEGALEIAKRSRGTPRIANRLLRRVRDYAEVRADGRI
TREVADLALRMLDVDEKGFDGMDRKILSTIIEKYDGGPVGIETLSAAVSEERDTLEDVYE
PYLIQEGFLNKTPRGRLATRLAYEHLGISVRSCRQLKIY
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgacggagcgaatcgtcgaacccaaaccccatgaagacgacctcccggtcgaaaacagt
ctgcgcccgaggcgactcgatgaatacgtgggacagcagaccgtcaaggagaacctcgcc
gtattcatcgaggcggccagacaacgcgccgaaccgctcgatcacgtgctctttcacgga
ttccccggtttggggaagacgtcgctcgccaccgtcatcagcaatgagctgggcgtgaac
atgcgcagcacttcgggtcccgtgatcgaaagggcgggcgatctcgcggccatcctgacc
aacctcgaacagggcgacgtgcttttcatcgacgaaatccaccgtctgaatcatgtggtc
gaggaaatcctctacccggccatggaagactttcaactggacatcatcatcggccagggg
ccttcggcccgtaccatcaagctggaccttcccccgttcaccctggtgggcgcaacgacc
cgcgcagggctgctttctccgccgttacgagaccggttcggggttacccttcggctggaa
ttttacaaggtggacgaattaaagctcatcgtcacccgctcggcacgaatcctcggtatc
cgggtcgacgcggagggcgcgctggaaatcgccaaacggtcccggggcactcctcgaatc
gccaaccggctgcttcgcagggtgagggattacgcggaggtccgcgcggatggcaggatc
acgcgcgaagtggcggacctcgcgctccgaatgctcgatgtggatgaaaagggattcgac
gggatggatcggaagatcctcagcaccatcatcgaaaaatacgacggcggtcctgtcggg
atagaaacgctctcggcggcggtgtccgaggagcgggataccctcgaggacgtctacgaa
ccctatctcatccaggaagggtttctgaacaaaacgccgcgcgggcgcctcgccacgcgc
ctggcctacgaacatctcggtatctccgtgcgttcctgtcggcagctgaaaatctactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system