KEGG   Syntrophobacter fumaroxidans: Sfum_1926
Entry
Sfum_1926         CDS       T00418                                 
Name
(GenBank) pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
sfu  Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:sfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfu03009]
    Sfum_1926
Enzymes [BR:sfu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Sfum_1926
Ribosome biogenesis [BR:sfu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Sfum_1926
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABK17611
UniProt: A0LJK9
Position
complement(2350093..2351007)
AA seq 304 aa
MTPMDFRIPDTDRWTADPALKGTGLARLIARYLLISEDRAEDLIDFGSVYIDGRVERNPA
RTLRGGEEIVVNWPRHGTQRHYEIDPARILYRDAHLLAYDKEAGVPSQQTPADAYNNLYA
ALIRFLAGEARASAPYVALHHRLDRETSGVMVFALDRAVNRRLGESFQEKRVVKDYLAWV
DGVPVLDRWTAVEDICRKDGRYRTCPQGRGKAARTLLRVLLRAGDRALIAARPVTGRTHQ
IRLHLAACGHPVIGDRLYGGTSGERLHLHALRLRLPHPKHDSELVLSAPVPEYWPEPRAV
DIPD
NT seq 915 nt   +upstreamnt  +downstreamnt
atgacacccatggatttccggatcccggataccgaccgctggacggctgatccggccctg
aaagggaccgggcttgcgcgcctcatcgcccgatacctgctcatctccgaggaccgggcg
gaggatctcatcgatttcgggtcggtttacattgacgggcgcgtcgagcggaatccggca
cgaacgctccggggcggcgaggaaatcgtcgtcaactggccccggcacggtacgcaacgg
cactatgagatcgatcccgcccgcatactctaccgggacgctcacctgctggcctacgac
aaggaagccggggtccccagccagcagacccccgccgacgcttacaacaacctctacgcg
gcgctgatccggtttctcgccggggaagcccgcgcctcggcgccgtacgttgcgctccac
catcgcctcgacagggaaaccagcggcgtgatggtgtttgccctggatcgcgccgtcaat
cgccggctcggggagtcattccaggagaagcgcgtggtgaaggattaccttgcctgggtg
gacggagttcccgtcctggaccgctggacggccgtcgaagacatttgcagaaaggacggg
cgctaccgaacctgcccgcaagggaggggaaaagcggcacggaccttgttgcgagtgctg
ttgcgcgcgggcgacagggcgttgatcgccgcccggcccgtcaccgggcgaacccaccag
atccggcttcatctcgccgcgtgcggccatccggtgatcggcgaccggctctacggcggg
acctcgggggaacggctccatcttcatgccctgcggctcaggctccctcatccgaagcac
gattcggagctggttctgagcgctcctgttccggagtactggccggaacctcgggcagtg
gacattccggattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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