KEGG   Syntrophobacter fumaroxidans: Sfum_3516
Entry
Sfum_3516         CDS       T00418                                 
Name
(GenBank) glutaminyl-tRNA synthetase
  KO
K01886  glutaminyl-tRNA synthetase [EC:6.1.1.18]
Organism
sfu  Syntrophobacter fumaroxidans
Pathway
sfu00970  Aminoacyl-tRNA biosynthesis
sfu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sfu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Sfum_3516
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sfu01007]
    Sfum_3516
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfu03016]
    Sfum_3516
Enzymes [BR:sfu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.18  glutamine---tRNA ligase
     Sfum_3516
Amino acid related enzymes [BR:sfu01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   Sfum_3516
Transfer RNA biogenesis [BR:sfu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Sfum_3516
 Prokaryotic type
   Other AARSs
    Sfum_3516
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2
Other DBs
NCBI-ProteinID: ABK19187
UniProt: A0LP35
Position
4300898..4302592
AA seq 564 aa
MSTNNSTPPPNFIRAIVAADVQSGKNYGRVITRFPPEPNGYLHIGHAKSICLNFGIAAEF
GGLCNFRFDDTNPSKEETEYVESIIEDVHWLGFDWGDRLYYASDYFERLYEYAVQLVRDG
NAYVCSLTADEIREYRGTLTQPGKDSPYRNRSVAENLDLLARMRAGEFEDGSHVLRARID
MASPNLNMRDPVIYRIRHVEHHRTGNKWCIYPMYDFAHGLSDSVEGITHSICTLEYEDHR
PLYDWFLDVLKVECHPQQIEFARLNLSHTVMSKRKLLQLVREGHVAGWDDPRMPTLAGIR
RRGYTPEAIRNFCELIGVGKRDSMVDAALLEHCIREDLNRRAPRVMGVVRPLRVVIDNYP
EGQVEELEAVNNPEDPGMGTRKVPFSRVIYIEQEDFMEAPPKKFYRLAPGREVRLRYAYF
ITCVDVVKDAQGKVVELRCTYDPATRGGGAPDGRAVKATLHWVSADHALEAEARLYDHLF
LKADPDDERDGLDFKAHINPASLEVLKSCRVEPSLAGAAPGTRYQLERQGYFCVDPDSTA
QKLVLNRTVTLRDTWAKVMKKEKP
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgtcgacgaacaattccacccctccacccaatttcattcgcgccattgtcgccgcggac
gtccagtcggggaaaaactacggccgggtcatcacgcgatttcctccggagcccaacggc
tatctgcacatcgggcacgccaagtccatctgcctgaatttcggaattgccgcggagttc
ggaggcctgtgcaatttccggttcgacgacaccaatccgagcaaagaagaaaccgaatac
gtggagtcgatcatcgaagacgtccactggctcggtttcgactggggcgacaggctctat
tacgcatcggattatttcgagcgactctatgagtatgcggtgcagctggtccgggacggc
aacgcctacgtttgcagcctgactgcggatgagatcagggaataccgcggaacgctcacc
cagccgggcaaggacagtccctaccggaaccgttcggtcgcggagaacctggacctgctg
gcgcgcatgcgggccggagaattcgaggacggttcccatgtactcagggccaggatcgat
atggcttctcccaatttgaacatgcgggatccggtgatttaccgcattcgccacgtcgag
catcacagaaccggcaacaaatggtgtatctaccccatgtatgacttcgcccacggtcta
tcggactccgtcgaaggaatcacgcattccatctgcactctcgagtacgaggaccatcgg
cccctctacgactggtttctggatgtcctgaaggtcgagtgccacccgcagcagatcgag
ttcgcgcgactcaacctgagccataccgtgatgagcaaacgcaagctcttgcagttggtc
cgggaaggacatgtggccgggtgggacgatccccgaatgccgacgctggccggaatccgc
cgtcgcggttatacgcccgaggcgattcgcaatttctgtgagctcatcggtgtcggcaag
cgggacagcatggtggacgcggcgctgctcgagcactgcattcgcgaggatctcaaccgc
cgcgcgcctcgggtcatgggggtggtgcggccgctccgcgtggtcatcgacaactatccc
gaagggcaggtggaggagctcgaagcggtgaacaatcctgaagatcccgggatggggacg
cggaaggtgcctttttcgcgggtgatctacatcgagcaggaagatttcatggaggctccg
ccgaagaagttctatcgtctcgcgccgggccgggaggtccgcctgcgctacgcgtacttc
atcacatgcgtggacgtggtcaaggacgcgcaggggaaagtagtcgagctacgctgcacc
tacgatccggccactcgcggcggaggcgctcccgacggcagggccgtgaaggccaccctg
cattgggtttccgcggaccatgccctggaagccgaggcacggctctacgatcatcttttt
ctcaaggcggatccggacgatgagagggacggtcttgatttcaaggcccacatcaatccc
gcatcgctcgaagtgctgaagtcatgccgggttgaaccgagccttgccggtgccgcaccg
ggaacccgttaccaactggagcggcagggctatttctgcgtcgatccggacagcaccgct
cagaaactggtcttgaaccgtaccgtcacgctccgtgacacgtgggccaaagtcatgaaa
aaggagaagccctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (109)   
   KEGG ORTHOLOGY (1)   
   RefGene (106)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (128)   

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