KEGG   Shigella flexneri 8401 (serotype 5b): SFV_3570
Entry
SFV_3570          CDS       T00377                                 
Symbol
treF
Name
(GenBank) cytoplasmic trehalase
  KO
K01194  alpha,alpha-trehalase [EC:3.2.1.28]
Organism
sfv  Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00500  Starch and sucrose metabolism
sfv01100  Metabolic pathways
sfv01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:sfv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    SFV_3570 (treF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sfv00537]
    SFV_3570 (treF)
Enzymes [BR:sfv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.28  alpha,alpha-trehalase
     SFV_3570 (treF)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sfv00537]
 Enzymes
  SFV_3570 (treF)
SSDB
Motif
Pfam: Trehalase Bac_rhamnosid6H DUF346
Other DBs
NCBI-ProteinID: ABF05601
UniProt: Q0SZB4
Position
complement(3651037..3652686)
AA seq 549 aa
MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMIEGLPASDALTPADRYL
ELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRDFDLRKFVENHFWLPEVYS
SEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQSYIVPGGRFSETYYWDSYFT
MLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVR
GARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDV
ETAKHSGCPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLFKLES
AIANISALKGEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWRREQLALFSAAAIV
PLYVGMANHEQADRLANAVRSRLLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMY
GDDLLGDEIARSWLKTVNQFYLEQHKMIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVR
RLIGLYGEP
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgctcaatcagaaaattcaaaaccctaatccagacgaactgatgatcgaggtcgatctc
tgctatgaactggacccgtatgaattaaaactggatgagatgatcgaggcagaaccggaa
cccgagatgattgaagggctgcccgcctctgatgcgctgacgcctgccgatcgctatctc
gaactgttcgagcatgttcagtcggcgaaaattttccccgacagtaaaacctttcccgac
tgcgcacccaaaatggacccgctggatattttaatccgctaccgtaaagtgcgccgtcat
cgtgattttgacttgcgcaagtttgttgaaaatcacttctggctgccggaggtctactcc
agcgagtatgtatcggacccgcaaaattccctgaaagagcatatcgaccagctgtggccg
gtgctaacccgcgaaccacaggatcacattccgtggtcttctctgctggcgctaccgcag
tcatatattgtcccgggcggccgttttagcgaaacctactattgggattcctatttcacc
atgctgggactggcggaaagtggtcgggaagatttgctgaaatgcatggccgataacttc
gcctggatgatcgaaaactacggtcacatccccaacggcaaccgcacctattatttgagc
cgctcgcaaccaccggtttttgcgctgatggtggagttgtttgaagaagatggtgtacgc
ggtgcgcgccgctatctcgaccaccttaaaatggaatatgccttctggatggacggtgca
gaatcgttgatccctaatcaggcctatcgccatgttgtgcggatgccggacggatcgctg
ctcaaccgttactgggacgatcgcgacacgccgcgtgacgaatcctggcttgaggacgtt
gaaaccgcgaaacattctggttgcccgcccaacgaggtgtaccgcgatttacgcgcggga
gcggcctccggttgggattactcttcccgttggctgcgtgatactggtcgtctggcgagc
attcgtaccacccagttcatccccatcgatctgaatgccttcctgtttaaactggagagc
gccatcgccaacatctcggcgctgaaaggcgagaaagagacagaagcgctgttccgccag
aaggccagtgcccgtcgcgatgcggtaaaccgttacctctgggatgatgaaaacggcatc
taccgcgattacgactggcgacgcgaacaactggcgctgttttccgctgccgccattgtg
ccgctctatgtcggcatggcgaaccatgaacaggccgatcgtctggcaaacgccgtacgc
agccggttactgacacctggcgggattttggcaagcgagtacgaaaccggtgaacagtgg
gataaacccaacggctgggcaccgttacaatggatggcaattcagggatttaaaatgtat
ggcgatgaccttctgggtgatgaaatcgcgcgcagctggctgaaaacggtgaatcagttc
tatctggaacagcacaaaatgatcgagaaataccatattgccgatggtgttccccgcgaa
ggcggcggtggcgagtatccgttgcaggatgggtttggctggactaacggtgtggtacgc
cgtttaattggtttgtacggcgaaccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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