KEGG   Shigella flexneri 8401 (serotype 5b): SFV_3887
Entry
SFV_3887          CDS       T00377                                 
Symbol
rph
Name
(GenBank) RNase PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
sfv  Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:sfv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfv03016]
    SFV_3887 (rph)
Enzymes [BR:sfv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     SFV_3887 (rph)
Transfer RNA biogenesis [BR:sfv03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SFV_3887 (rph)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: ABF05895
UniProt: Q0SYH0
Position
3991523..3992239
AA seq 238 aa
MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT
AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ
ADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAICDLEYVED
SAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQKAALAN
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcgtccagcaggccgtagcaataatcaggtgcgtcccgttaccctgactcgtaactat
acaaaacatgcagaaggctcggtgctggtcgaatttggcgataccaaagtattgtgtacc
gcctctattgaagaaggcgtgccgcgcttcctgaaaggtcagggccagggctggatcacc
gcagagtacggcatgctgccacgttctacccacacccgtaacgctcgtgaagcggcgaaa
ggtaagcagggtggacgcacaatggaaatccagcgtctgatcgcccgtgctcttcgcgcg
gcagtagatttgaaagcgctgggtgagttcaccattacgctggactgcgacgtgcttcag
gctgatggtggcactcgtaccgcgtcgattacgggtgcctgcgtggcgctggcagatgcg
ctacagaagctggtggaaaacggcaagctgaaaaccaacccgatgaaagggatggtagcc
gcagtttctgtcggtattgtaaacggtgaagcaatttgcgatctggaatacgttgaagac
tcagccgcagagaccgacatgaacgtagtgatgaccgaagacgggcgcatcattgaagtg
caggggacggcagaaggcgagccgttcacccatgaagagctactcaccttgttggcgctg
gcccgagggggaatcgaatccattgtagcgacgcagaaggcggcgctggcaaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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