KEGG   Serratia fonticola DSM 4576: WN53_02290
Entry
WN53_02290        CDS       T04030                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sfw  Serratia fonticola DSM 4576
Pathway
sfw03410  Base excision repair
sfw03430  Mismatch repair
sfw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    WN53_02290
   03430 Mismatch repair
    WN53_02290
   03440 Homologous recombination
    WN53_02290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfw03400]
    WN53_02290
DNA repair and recombination proteins [BR:sfw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     WN53_02290
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     WN53_02290
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WN53_02290
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB DUF2065
Other DBs
NCBI-ProteinID: AKG68057
UniProt: A0A0F7H845
Position
complement(540299..542032)
AA seq 577 aa
MSIKTQLRRREAADASHLPASLPPLLRRLYALRGVKGEQELERSVKGMLPWQQLSGIDAA
VAILQQALADGRRIMVVGDFDADGATSTALTVLALRSMGCSSIEYLVPNRFEDGYGLSPE
VVEQAAARGAELIVTVDNGISSHAGVDVAHGLGIQVLVTDHHLPGDTLPAAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRAKLRESGWFEQRALAMPNLAELLDLVALGTVADVVPL
DANNRILVYQGLNRIRAGKCRPGIRALLEVANRDARQLAASDLGFALGPRLNAAGRLDDM
SIGVAMLLSDDIAQARMLANDLDALNQTRREIEQGMQVEALELCDQLERTTTELPYGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGILKGSGRSVAGLHMRDALERLDTLNP
GLMMKFGGHAMAAGLSLEEAKFDEFRQRFGELVGEWLDPAMLEGVIWSDGELMMQELTLT
TAELLREGGPWGQAFPEPTFDGKFRILQQRLVGEKHLKLMIEPLGGGPLLDGIAFNIDTT
QWPDSSIKEVELAYKLDVNEFRGNRNVQLLIQHLWPR
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgagtattaaaacccaattacgccgccgcgaggcggcagatgccagccatttacccgcc
agcctgccccccctgttgcgccgcttatacgcattgcgcggagttaagggcgagcaggag
ctggagcgtagcgtcaagggtatgttgccttggcaacagttgagcggtatcgatgctgcg
gtagcgatattgcagcaggcactggccgatggccgccgcatcatggtggtgggcgacttt
gatgccgacggcgccaccagtaccgcactgacggtgctggccttgcgcagcatgggctgt
agctccatcgaatatctggtacccaaccgttttgaagatggttatggcctgagtcccgaa
gtggtggagcaggcggcggctcggggtgctgagctgatcgtcacggtcgataacggtatc
tcctcgcatgcgggcgttgacgttgcgcacggcttgggaatacaggtgctggtcaccgat
caccatctgccgggggatactttgcctgcggcagaggcgatcgttaacccgaacctgcgt
gactgcgattttccctccaaatccctggctggtgtcggtgttgccttttatctgatgctg
gctttgcgggccaagctgcgtgaaagtggctggtttgaacagcgtgcgctggctatgcct
aatctggccgaattgctggatctggtggcgctgggcacggtggcggacgtggtgccgctg
gatgccaacaaccgtattctggtgtatcaggggctgaaccgcatccgggctggcaagtgt
cggccaggtattcgcgctctgctggaagtggccaaccgcgatgcgcggcaattggcggcc
agcgatctcggctttgcccttgggccacggctgaacgcggcagggcggctggacgatatg
tcgatcggcgtagccatgctgttgagcgacgatattgcccaggcgcgtatgttggccaac
gatctcgacgcgctcaaccagacccggcgtgagattgagcaggggatgcaggtggaggcg
ctggagctgtgcgatcaactggaacgcactaccactgaactgccttacgggttagcgatg
tatcacccagaatggcatcagggcgtggtgggtattctggcttcgcgcattaaagagcgt
ttccatcgcccggtgatcgcctttgcccctgcgggcgacggcattctgaaaggctctggc
cgctcggtagccgggttgcatatgcgtgatgcgctggagcggctcgataccctgaatcct
gggctgatgatgaagttcggcggccatgcgatggcggcgggcttgtcgctggaagaggcc
aagtttgacgagttccgccagcgttttggcgagctggtcggcgaatggctcgatccggcg
atgctggaaggcgtgatctggtcggatggcgaactgatgatgcaggaactgaccctgacc
accgcagagcttctgcgtgagggcgggccgtgggggcaggcgtttcctgagccaaccttt
gacggcaagttccgtatcctgcaacagcggctggtgggcgagaaacacctgaagctgatg
atcgaaccgctcggtggcggcccattgttggacggtatcgccttcaacatcgacaccaca
cagtggccggacagcagcatcaaagaagtggaactggcgtacaaactggacgtgaatgag
ttccgtggcaaccgtaacgtgcagttgctaatccaacacctctggccgcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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